Detailed information on CNT30258531


BLAST search results

BLAST vs Swiss-Prot:
sp|P48684|RBL_AVESA, E-value = 1e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201084Avena sativaPisum sativum96.9826.3287.2578forward
CNT30565170Avena sativaActinidia chinensis99.1651.7588.49591forward
CNT3089355Avena sativaVigna radiata52.5252.5282.11313forward
CNT30539441Avena sativaBrassica napus97.3211.8788.45580forward
CNT30554212Avena sativaOryza glaberrima99.515.7295.11593forward
CNT3017995Avena sativaZea mays99.538.3895.11593forward
CNT30121217Avena sativaCitrus clementina97.4864.7788.47581forward

Expression of CNT30258531

Peptides detected in this lncRNA

>peptide 1 (31 aa)
FFADNPNFGLIVHPNKGRPYLFNLSLSTWIP*

>peptide 2 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30258531
AATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGG
CGGACCTTGGAAAGTTTTTGTATAAGCAGGGGGAATTCGTAGATCCTCCAGACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCCACAATGGAA
GTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGAT
AGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACAAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTC
TTCCGGCGGAACCCCAGGTTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTATCCTTGGTTTCATACTCCGGGGTGTAGTAAGTCAATTTATAATCT
TTAACACCAGCTTGAAATCCAACACTTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTACAACTCTTGAATTAAGAATTCTCACAATAA