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Detailed information on CNT30258280

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30629265	Avena sativa	Vigna unguiculata	87.45	38.16	90.51	432	forward
CNT30237333	Avena sativa	Brassica oleracea	91.9	29.46	88.77	454	forward

Expression of CNT30258280

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30258280
AGGCGGACCTTGGAAAGTTTTTGTATAAGCAGGGGGAATTCGTAGATCCTCCAGACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCCACAATG
GAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGT
GATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCACACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGC
TTCTTCCGGCGGAACCCCAGGTTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTATCCTTGGTTTCATACTCCGGGGTGTAGTAAGTCAATTTATAA
TCTTTAACACCAGCTTGAAATCCAACACTTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTACAACTCTTGAATTAAGAATTCTCAC