Detailed information on CNT30257620


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30347837Avena sativaEragrostis tef35.1915.5684.17120forward
CNT30104431Avena sativaOryza rufipogon35.1918.5283.33120forward
CNT3019347Avena sativaCyanidioschyzon merolae41.945.2386.01143forward

Expression of CNT30257620

Peptides detected in this lncRNA

>peptide 1 (34 aa)
TDQRYAGDNRLMTPKSSYRRSRLAPRCRLITSWG*

Sequence

>CNT30257620
ACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGG
GTTGAAGAAGGTCCCAAGGGTTCGGTTTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCAC
TTTCATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTG
GGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGT