CANTATAdb - search

Detailed information on CNT30257557

BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 1e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30150944	Avena sativa	Brachypodium distachyon	47.83	54.34	90.36	363	forward

Expression of CNT30257557

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MCMSLHIAGSRIHISALHPRLIGTYIQAYVHTQSYCF*

>peptide 2 (33 aa)
MKPTLLNSRQGTHLERIKKSICFRRASSESGGR*

Sequence

>CNT30257557
GTCATGTAATGTTTTTTTACCTGTAAGTAAAGACGCTTGAAATTTGTTTTCATAATAAAGGCATCTTAGCCGTCGAAAGTACATGAACTTTTTATCGACA
GACATGAAAACTTAATAGAAATTCCAATCAATTATTATCAAACACACTTGTGGATTGGATATAAACACATTCGGAAAAAAATATATGTGTATGTCCTTAC
ATATAGCCGGTTCTAGAATTCACATTTCAGCTCTTCACCCTAGGTTGATAGGTACATACATACAAGCATACGTACATACACAGTCATATTGCTTTTAAAA
CAAACCCTGGAGCAGAGTCGTCGGCAAAAGTATATAGCGCGGCCGTTGTTTCATATAGCGGCCACTGTTTCAGCTGGCAACTTATGCCTTTGCCTTGCCA
GATTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGACGGATGTTGTCGAAGCCGATGATGCGGACATAGGCGTCAGGGTACT
CCTTCTTGACCTCCTCCACCTCCTTGATGACCTGGGAGGCGTCGGTGCAGCCGAACATGGGCAGCTTCCACATTGTCCAGTACCTGCCGTCATAGTATCC
AGGAGTGCTGCCGTGCTCGCGGAAGATGAAGCCAACCTTGCTGAACTCGAGGCAAGGAACCCACTTGGAGCGGATCAAGAAGTCGATCTGCTTCAGGAGG
GCCTCCTCTGAGAGTGGTGGCAGGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAAT