Detailed information on CNT30256662


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30720298Avena sativaTriticum spelta5.4926.793.2259reverse complement

Expression of CNT30256662

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MWQDSSNIALNRVIIKLMVVRTEWFSNHSRGVLVGIDTPGDKEIHSIRSCTVMFIIVWPFFSFLKSGILCPISRLKYRG*

>peptide 2 (38 aa)
MRITLCFISENVKCRRINMICIGLNTMVHTIKNFVLFAG

>peptide 3 (45 aa)
STTTNTSPSGWFPPFPVFVSSSVEYEIEIEIEDRDQHPRSSKNNT*

>peptide 4 (47 aa)
MTKEYMPGNENNLVFHLRKCKVSTNQYDMYWTQYYGSHNKELCVICRG

>peptide 5 (98 aa)
INYYKYFTIWLVPSISGVCFFLGRIRNRDRDRRPRSTPSKLEEQYLTNCTQVKYKAPEDLLICYQLAKCKCSPEDEFRTTSTSTSSLGFLAGILESMG*

Sequence

>CNT30256662
ATCAACTACTACAAATACTTCACCATCTGGTTGGTTCCCTCCATTTCCGGTGTTTGTTTCTTCCTCGGTAGAATACGAAATCGAGATAGAGATCGAAGAC
CGAGATCAACACCCTCGAAGCTCGAAGAACAATACTTGACCAACTGTACCCAAGTCAAGTACAAGGCTCCCGAAGATTTGCTTATTTGTTATCAACTGGC
AAAGTGTAAGTGTTCCCCTGAAGACGAGTTCCGTACTACATCGACATCGACGAGTAGCTTGGGGTTCCTGGCCGGCATCCTGGAATCTATGGGCTGAGAC
GTCATCGTTATGCTTCAGGCCTCTTAGGCCATTTGTTAAGTTTGCTATACTTAATAGCATAATTTGCCTTCCGTTGTTTGATGTTTGTGGTCAGTGACCT
TTGCTTGTAATAATTTGGTTCTCTGCTCAGTTATGCGCTTGCTGTAATAATTTTTGTGTCGTAGGATCAGTGCTACATTATCGATTCTTCACTGGATATC
CTCGAGCTCAAGGTTAAGCCTATGTTAGACAGAGGTCTGGGATTTGTTTAGCCCTGGTCCCGGGAGTGTCACATTCCTTTACTAAAGATCATTTCACCAC
AAGACACATGTGAACTTGGCTACAATATGGATGTGGCAAGATTCTTCAAACATTGCTCTTAACAGAGTAATTATAAAGTTGATGGTTGTTCGTACCGAAT
GGTTCTCAAATCATTCACGTGGTGTGCTTGTGGGAATTGATACTCCTGGCGATAAAGAGATACACTCTATCCGATCATGTACTGTGATGTTCATCATCGT
CTGGCCCTTTTTTTCCTTTTTAAAGAGTGGCATTCTATGTCCAATATCTCGATTGAAGTATAGAGGTTAGAATAAATAGACTAACGAACATGTGATCAAG
TTGTTGGACGCAGGAACATTGATAGTACGGGATGACTAAAGAGTACATGCCAGGAAATGAGAATAACCTTGTGTTTCATCTCAGAAAATGTAAAGTGTCG
ACGAATCAATATGATATGTATTGGACTCAATACTATGGTTCACACAATAAAGAACTTTGTGTTATTTGCAGGGGT