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Detailed information on CNT30256341


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136185Avena sativaLolium perenne102.7679.0690.4521forward

Expression of CNT30256341

Peptides detected in this lncRNA

>peptide 1 (60 aa)
GQGSVYVHGWQHQHRRVYIQNVYRLLYHTTYTNGTSPPLLALLQLNLIILSYPTIIYCNQ*

>peptide 2 (44 aa)
GRAVFMFMAGNTNTDECTFKMSTDFFITQPIQMVPVLRFSLFFS*

>peptide 3 (57 aa)
AGQCLCSWLATPTPTSVHSKCLQTSLSHNLYKWYQSSASRSSSAEPNHPLLPDHNIL*

>peptide 4 (50 aa)
MQTGTPSVASHWRHPICRHRRHTHPAHRRHAHSTHRRWTTHTRWSRQRERE

Sequence

>CNT30256341
GGGCAGGGCAGTGTTTATGTTCATGGCTGGCAACACCAACACCGACGAGTGTACATTCAAAATGTCTACAGACTTCTTTATCACACAACCTATACAAATG
GTACCAGTCCTCCGCTTCTCGCTCTTCTTCAGCTGAACCTAATCATCCTCTCCTACCCGACCATAATATACTGTAACCAGTAAATTAACTCGGTACCTCG
GCTAGGGGTATTGCTCGCCAAAATTGTCCTGGTACCAAAAGAATATGAATCGAAAAACCAATAGCCCGAATCTACAACTTCAAAGATACCTCGGGATCAT
CGCGCTTCCCATATGTGTAAACTGAAACAATCGACATCATCTATGTTCTTCAAATGCAAACTGGAACACCCTCAGTAGCTTCCCATTGGAGGCATCCCAT
ATGCAGGCATCGGAGGCATACCCATCCCGCCCATAGGAGGCATGCCCATTCCACCCATAGGAGGTGGACCACCCATACCAGGTGGAGCAGGCAACGCGAG
AGGGAGC