Detailed information on CNT30255091


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674998Avena sativaSetaria viridis27.847.1196.09179forward
CNT30613891Avena sativaArabis alpina16.326.0585.71105forward
CNT30686633Avena sativaTriticum urartu15.6836.4697.03101reverse complement
CNT3051266Avena sativaCucumis sativus28.2624.2782.97182forward

Expression of CNT30255091

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKRPTR*

>peptide 2 (96 aa)
MAELWKRRSVLKRWKGSLRMSSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLGALPPVDLRAVCFVRAISEEGGGARVWVRWLR

>peptide 3 (31 aa)
REHKLSDAADDKIRITSRNCISISFQRHTTT*

>peptide 4 (34 aa)
MRPDDTSYQHHEQVLPTAQDTNSCYRQHRRRTEA*

Sequence

>CNT30255091
CGAGAACACAAATTATCAGACGCAGCAGATGACAAAATTAGGATAACATCCAGGAACTGCATTTCGATTTCATTTCAGAGACATACCACTACATAGGACA
GAATCCCCATGAGACCAGACGACACATCATATCAACACCACGAACAGGTACTACCGACAGCACAGGACACGAACAGTTGCTACAGACAGCACAGACGGCG
AACTGAAGCCTAGGCCCTCTCCCCACGGATGCGACGGGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTG
TCCTCGAAGAGGCCGACGAGGTAGGCCTCGGCGGCCTCCTGCAGCGCGGAGATGGCGGAGCTCTGGAAGCGGAGGTCGGTCTTGAAGCGCTGGAAGGGGA
GCTTGCGGATGAGCAGCTCGGTGCTCTTCTGGTACTTGCGGATCTCACGGAGCGCGACGGTGCCGGGGCGGAAGCGGTGGGGCTTCTTCACTCCGCCGGT
GGCCGGGGCGGACTTGCGGGCGGCCTTGGTCGCCAGCTGCTTCCTCGGGGCCTTGCCGCCGGTGGACTTACGGGCAGTCTGCTTCGTGCGGGCCATCTCG
GAGGAGGGAGGAGGCGCTAGGGTTTGGGTTCGGTGGCTGCGCTG