Detailed information on CNT30255062


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 2e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628401Avena sativaVigna unguiculata27.2938.180.47128forward
CNT30474628Avena sativaSaccharum spontaneum65.6725.994.16308forward
CNT30329187Avena sativaDioscorea rotundata31.1337.6381.51146forward

Expression of CNT30255062

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MRRASWMSLGMMVTRLAWMAHRLVSSKSPTRYASAASWSASTAWLWNRRSVLKSWAISRTRRWKGSLRMRSSVLFWYLRISRSATVPGL*

Sequence

>CNT30255062
AAACAAATCTGTCGTATCACGAAGACCTAACAGGATCTAAATGCAAAAGGGGATCAATCAACTAATTTCGCGGTGGAGCGGGGCTGGTACGCGGAGGCGC
CGGCGATTGGCCTAGGCGCGCTCGCCACGGATGCGGCGGGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCACAGGTTGG
TATCCTCGAAGAGCCCGACGAGGTACGCCTCCGCGGCCTCCTGGAGCGCCAGCACGGCGTGGCTCTGGAACCGGAGGTCCGTCTTGAAGTCCTGGGCGAT
CTCGCGGACCAGGCGCTGGAAGGGGAGCTTGCGGATGAGGAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGGAGCGCCACCGTGCCGGGCCTGTAG
CGGTGGGGCTTCTTCACGCCGCCGGTGGTCGGCGCCGACTTCCTCGCGGCCTTGGTGGCGAGCTGCTTC