Detailed information on CNT30254957


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 4e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3058538Avena sativaAmborella trichopoda30.586.8687.8474forward

Expression of CNT30254957

Peptides detected in this lncRNA

>peptide 1 (79 aa)
ASWMSLGMMVTRLAWMAHRLVSSKSPTRYASAASWSASTAWLWNRRSVLKSCAISRTRRWKGSLRISSSVLFWYLRISRS

>peptide 2 (79 aa)
ELDVLGHDGDALGVDGAQVGILEEPDEVRLRGLLERQHGVALEPEVRLEVLRDLADQALEGELADQQLRALLVLADLTER

Sequence

>CNT30254957
GCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCACAGGTTGGTATCCTCGAAGAGCCCGACGAGGTACGCCTCCGCGGCCT
CCTGGAGCGCCAGCACGGCGTGGCTCTGGAACCGGAGGTCCGTCTTGAAGTCCTGCGCGATCTCGCGGACCAGGCGCTGGAAGGGGAGCTTGCGGATCAG
CAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCACGGAGCGC