Detailed information on CNT30254792


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M644|LEP_ARATH, E-value = 5e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692625Avena sativaOryza sativa21.4843.0588.5496forward
CNT30521857Avena sativaSetaria italica27.077.1287.6121forward
CNT30560805Avena sativaActinidia chinensis22.8221.7983.33102forward
CNT30589662Avena sativaMusa acuminata23.0419.5184.47103forward
CNT3087835Avena sativaVigna radiata31.15.9683.45139forward
CNT30437038Avena sativaAegilops tauschii20.1311.7286.6790forward
CNT30455848Avena sativaSaccharum spontaneum36.9111.0183.64165forward
CNT30349666Avena sativaEragrostis tef32.8912.2486.39147forward
CNT30101508Avena sativaOryza rufipogon39.1567.0595.43175forward
CNT30116505Avena sativaOryza nivara21.4813.186.4696forward
CNT30550541Avena sativaOryza brachyantha51.6817.8793.51231forward

Expression of CNT30254792

Sequence

>CNT30254792
CAGTGATCGGTTCGCCGCTTTAGCTCACTAGCTGCTGGACGGGACCGGCGACGAACCACGGCTGCGCTGGGAGGGTAAGCTGGACCGGAGCCTGCACCGG
TGGCGGCGGCGGCACCAGGGCCATGGCCATGGACGCCGCCGCGGCCTCGCCTCTCTTCCTCCGCTTCGACGACCCGGAGCTCGTTGGCTGAGGACACGGA
CGCTTGTCGCCCACTGCCGCGGCGGCGGCGGCCGCCGCCGCGATCTCGGAGCCGATGCGGAGCGGGAAGTTGAGGAGCGCGCGGGAGCCGCGCATGCGGT
AGGCGGCGCGGTCGTACGCCACGGCGGCGTCCTCGGCGCTGTCGAACGTGCCGAGCCACACGCGCGCGCCGTTCTTGGCCGGGTCCCGGATCTCCGCCGC
GAACTTGCCCCACGGCCGCTGCCTCATCCCTCTGAAGTGCTTTCCCC