Detailed information on CNT30254684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Avena sativaOryza sativa84.8924.9389.01191forward
CNT30671777Avena sativaSetaria viridis4033.9688.8990forward
CNT30520361Avena sativaSetaria italica85.33886.46192forward
CNT30531266Avena sativaEucalyptus grandis44.4423.6485100forward
CNT30546615Avena sativaIpomoea triloba35.5629.748580forward
CNT30375565Avena sativaArabidopsis thaliana24.8922.6787.556forward
CNT30180948Avena sativaSecale cereale52.895.892.44119forward
CNT30297908Avena sativaTriticum aestivum34.6710.6191.0378forward
CNT30225926Avena sativaHordeum vulgare3210.697.2272forward
CNT30387873Avena sativaTriticum turgidum79.1135.0491.57178forward
CNT30568278Avena sativaActinidia chinensis39.1117.8587.588forward
CNT30586754Avena sativaMusa acuminata40.8934.0791.392forward
CNT30552571Avena sativaOryza glaberrima87.5677.8792.89197forward
CNT30436090Avena sativaAegilops tauschii36.897.9793.9883forward
CNT30657898Avena sativaTriticum dicoccoides40.8912.5993.4892forward
CNT30612661Avena sativaArabis alpina34.6726.9985.978forward
CNT30465661Avena sativaSaccharum spontaneum24.8912.991.0756forward
CNT30139319Avena sativaLolium perenne326.1597.2272forward
CNT3013604Avena sativaZea mays39.566.597.7589forward
CNT30228928Avena sativaAnanas comosus27.1115.6493.4461forward
CNT30653715Avena sativaRosa chinensis32.8912.6990.5474forward
CNT30213185Avena sativaHelianthus annuus31.5612.8485.9271forward
CNT30681057Avena sativaTriticum urartu91.5620.2289.32206forward
CNT30346584Avena sativaEragrostis tef91.5625.6586.89206forward
CNT30477240Avena sativaArabidopsis halleri42.6716.6786.4696forward
CNT30362596Avena sativaSorghum bicolor60.4423.0185.29136forward
CNT30596194Avena sativaOryza meridionalis30.6715.8692.7569forward
CNT30370019Avena sativaOryza glumipatula32.4414.3793.1573forward
CNT30109688Avena sativaOryza longistaminata27.1111.5193.4461forward
CNT30320106Avena sativaAsparagus officinalis41.335.2182.893forward
CNT30331328Avena sativaDioscorea rotundata22.229.759850forward
CNT30148622Avena sativaBrachypodium distachyon21.7820.0889.849forward
CNT30102464Avena sativaOryza rufipogon443.994.9599forward
CNT30576241Avena sativaOryza barthii3210.8693.0672forward
CNT30116009Avena sativaOryza nivara90.2224.9492.61203forward
CNT30604398Avena sativaOryza punctata91.568.7188.83206forward
CNT30112149Avena sativaFicus carica33.339.558875forward
CNT3039904Avena sativaMarchantia polymorpha28.893.8689.2365forward

Expression of CNT30254684

Peptides detected in this lncRNA

>peptide 1 (74 aa)
NMYRCSSYRDVGVTGVALGVGGGEDGVDEHEGADDLGREPRALGVAFAEPVGAAAVPLVVGALEALDEPHAADGA

Sequence

>CNT30254684
AACATGTATAGGTGCTCATCTTACCGGGATGTGGGAGTCACGGGCGTTGCGCTTGGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGCACGAAGGTGCCG
ATGATCTCGGCCGCGAGCCCCGTGCCCTTGGAGTAGCCTTCGCTGAGCCCGTTGGCGCCGCCGCCGTACCTCTGGTAGTAGGAGCTCTGGAAGCCCTTGA
CGAGCCCCACGCCGCAGATGGCGCC