Detailed information on CNT30254117


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 2e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674990Avena sativaSetaria viridis23.9332.3394.57129forward
CNT30274756Avena sativaChenopodium quinoa45.2722.6382.79244forward
CNT30709007Avena sativaGlycine max34.3277.7384.86185forward
CNT3084857Avena sativaVigna radiata45.0819.7982.3243forward
CNT30609694Avena sativaGossypium raimondii32.2822.7279.89174forward
CNT30368649Avena sativaSorghum bicolor46.756093.65252forward
CNT3018856Avena sativaCyanidioschyzon merolae34.8881.7481.91188forward

Expression of CNT30254117

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MSSSVLFWYLRISLSATVPGRKRCGFFTPPVAGADLRAALVASCFRGALPPVDLRAVCFVRAMAVGEGAGDWMRVRMERFDL

Sequence

>CNT30254117
GTCAAATCACATCACATTTCTTTGAAGATAAGTCATTACAGCAACACAGGATAACGAGCAGGTTACCCATCTAACAGATCAGGAAACACATCGCCTAAGC
AAACAGAACAGGTACGGTACGAGCACAGGAAAAGAAACACGAGTCCTAGCAGACGACGACAGCAGCAGCTGGACCGACGAGGTAGGCCTCGGCAGCCTCC
TGCAGCGCGGAGACGGCCGAGCTCTGGAAGCGGAGGTCGGTCTTGAAGTCCTGCGCGATCTCCCTGACGAGGCGCTGGAACGGGAGCTTGCGGATGAGCA
GCTCCGTGCTCTTCTGGTACTTGCGGATCTCCCTGAGCGCGACGGTGCCGGGGCGGAAGCGGTGCGGCTTCTTCACGCCGCCGGTGGCCGGGGCGGACTT
GCGCGCCGCCTTGGTGGCCAGCTGCTTCCGCGGCGCCTTGCCGCCGGTGGACTTGCGGGCGGTCTGCTTCGTGCGGGCCATGGCGGTGGGTGAGGGCGCC
GGAGACTGGATGCGAGTGAGAATGGAGAGGTTTGATTTG