Detailed information on CNT30252645


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 2e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30680070Avena sativaTriticum urartu98.8344.6494.09254forward
CNT30581231Avena sativaEchinochloa crusgalli82.8898.6192.96213forward
CNT30117266Avena sativaOryza nivara68.0948.4896175forward

Expression of CNT30252645

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MPILVRSSGMKMPAAPSIAHRQCTSSACTFHFKLSGSDPATKIDQRLFTS

>peptide 2 (84 aa)
PEDGGVAGVGEVSEERGGVREVLLLAGGVPRRRVEDADLGQELRDEDARRAQHRPPAVHQLRLHVPLQALRVRSCNKNRSKVVHV

Sequence

>CNT30252645
CCCTGAAGATGGTGGCGTGGCCGGGGTCGGCGAGGTGAGCGAAGAGCGTGGTGGTGTCCGTGAAGTACTCCTGCTCGCCGGCGGTGTACCACGACGGCGT
GTTGAGGATGCCGATCTTGGTCAGGAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCCGCCTGCACGTTCCAC
TTCAAGCTCTCCGGGTCCGATCCTGCAACAAAAATCGATCAAAGGTTGTTCACGTCG