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Detailed information on CNT30252486


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 1e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30181095Avena sativaSecale cereale64.1825.191.21387forward
CNT30658640Avena sativaTriticum dicoccoides63.6873.4291.15384forward
CNT30149714Avena sativaBrachypodium distachyon61.3655.0689.19370forward

Expression of CNT30252486

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MCMCSRLYNPHMHVPRLYVDRHNYMGPEVKPQKESLKKK*

>peptide 2 (33 aa)
MKPTLLNSRQGTHLERIKKSICFRRASSESGGK*

Sequence

>CNT30252486
CTTTCCATCAATTAACAAGAAAGCAATAGTCTGTAGTTTGTATATATAAATATATATGTGTATGTGTAGCCGGTTGTACAATCCACATATGCATGTTCCT
CGACTCTATGTTGACAGACACAATTATATGGGACCAGAAGTAAAACCCCAAAAGGAGAGTCTCAAAAAAAAGTGAACTAAAATGCCTTGCATTGGCAGTT
ATTCCCAGCTCGTGGCTTAGGCCTTTCCGGACTCCTCGCAGCCTGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACTTGGCGGATGTTGTCGAAGCC
GATGATGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCCTTGATGACCTGTGAGGCGTCGGTGCAGCCGAACATGGGCAGCTTCCAC
ATTGTCCAGTACCTGCCGTCGTAGTATCCGGGAGTGCTGCCGTGCTCACGGAAGATGAAGCCAACCTTGCTGAACTCGAGGCAGGGAACCCACTTGGAGC
GGATCAAGAAGTCGATCTGCTTCAGGAGGGCCTCCTCTGAGAGTGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATTGGCCACACCTG
AAT