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Detailed information on CNT30252412


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30388443Avena sativaTriticum turgidum10.1526.688.6179reverse complement

Expression of CNT30252412

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MHSLLQAEAQSDDSSVHSGTVLAFIVGGKCS*

>peptide 2 (32 aa)
LTLCISGFQRDPPHSGWAMWQPGRFQDLGGGL*

>peptide 3 (42 aa)
AYPVYFWFSEGSSTFRVGNVATRSVPGSGRWPVMSMAPFQSH*

>peptide 4 (43 aa)
MAENHRESDAMQPCKKGTCRTRGRGKCNYLKVNIVKSILDVLW*

>peptide 5 (44 aa)
LPCVFLVFRGILHIQGGQCGNQVGSRIWEVACDEHGTFSVTLIN*

Sequence

>CNT30252412
GCTTACCCTGTGTATTTCTGGTTTTCAGAGGGATCCTCCACATTCAGGGTGGGCAATGTGGCAACCAGGTCGGTTCCAGGATCTGGGAGGTGGCCTGTGA
TGAGCATGGCACCTTTTCAGTCACACTGATAAACTGACACTGATATACAAATACTCCGATCCTTCAAAACCTGGAAATAAAAAAATGAATGATATTAGGT
TCAAAGTAGTTATATAGTTACAGAAGCAAAGGTGCAAGGAAAACATGGAAGCATCTCCTATGAATTTACTGGAGATTCATGCATAGTCTTTTGCAGGCTG
AAGCTCAGAGTGATGATTCTTCGGTTCACAGTGGGACGGTCCTCGCCTTCATAGTTGGGGGAAAGTGTAGCTAAGCCTGATACCAAGCATTTTGATCTCA
AGGTAATAGTGGTTACTTCAGTCATGGCGGAAAATCACAGGGAATCTGATGCAATGCAGCCCTGCAAAAAAGGAACTTGCAGAACAAGAGGAAGGGGCAA
GTGCAACTATTTGAAAGTTAACATCGTAAAGTCAATATTAGATGTTCTCTGGTAACAAATGGGTGATAATTATTGAGAGTATCATACTGGAAAACCAGAA
GCGGAAAAAATAGTAAGTCTTCTAATGCTTGTTTTAGTTTGTACATGGCCATAAGCATATTTTGACCACCTTGTACCATACTGCTAGTAGTAATTCTGCT
ATTGGCTATGAATCACTCCTTGACCACCTTGTACCATATAGATGCCTGATTGGAATGCAGTACATTTTGATTCGTTCA