Detailed information on CNT30252195


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678372Avena sativaSetaria viridis24.7635.1592.23103forward
CNT30391948Avena sativaTriticum turgidum2537.4187.5104forward
CNT30553080Avena sativaOryza glaberrima32.2148.7392.54134forward
CNT30446776Avena sativaSaccharum spontaneum14.920.296.7762forward
CNT30721365Avena sativaTriticum spelta27.446.3491.23114forward
CNT30596665Avena sativaOryza meridionalis24.0420.9291100forward

Expression of CNT30252195

Peptides detected in this lncRNA

>peptide 1 (79 aa)
HGLAGDLVDEGEGRVAFLVLDLVAVPHVLEPVLVLVTGAGLPSSSLILLLKRMSLNQCWCSSRGLVGARTTLPSRTERQ*

Sequence

>CNT30252195
CATGGCCTGGCCGGTGACCTTGTTGACGAGGGCGAAGGCAGGGTAGCCTTCCTCGTCCTTGATCTTGTTGCTGTGCCTCATGTCCTTGAACCAGTGCTGG
TGCTCGTCACGGGGGCGGGGTTGCCCTCCTCGTCCTTGATCTTGTTGCTGAAGCGCATGTCCTTGAACCAGTGCTGGTGCTCGTCGCGCGGGTTGGTGGG
GGCGAGGACGACGTTGCCGTCGCGGACGGAGAGGCAGTAGCCCTCGTCGGCCTTGCAGAAGAGCTTGAAGGTGGGCTCGTGGCCGCCGGGGGCCGGGGCG
TGGGGCGCCGCGGGGTTCTGGCCGTGGTGGCCATGGTGACCGAGGCCGAACATTGTCAGGGGTTTTGGGGAGTGTTTGATTGTGTGATCAACTCAGCACG
AAGGTTTGGGACGGGG