Detailed information on CNT30252158


BLAST search results

BLAST vs Swiss-Prot:
sp|P31093|PSAN_HORVU, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221417Avena sativaHordeum vulgare41.8826.4990.62160forward
CNT30385322Avena sativaTriticum turgidum37.4341.9491.61143forward
CNT30436158Avena sativaAegilops tauschii42.9355.0391.46164forward
CNT30658022Avena sativaTriticum dicoccoides42.9360.7492.07164forward
CNT30680368Avena sativaTriticum urartu42.9362.3692.07164forward
CNT30349480Avena sativaEragrostis tef14.9223.2791.2357forward

Expression of CNT30252158

Peptides detected in this lncRNA

>peptide 1 (81 aa)
LSLLFSRYSSNTLACAEPVAAVTAKTAARPRSADRRSLAGATCTRFAAAGEALADCGTAAAGLRPTTLEFTPAMVLVRFLD*

Sequence

>CNT30252158
TTGAGTTTGCTCTTCTCGAGGTACTCGTCAAACACGCTGGCCTGTGCGGAGCCGGTGGCAGCAGTGACGGCGAAGACGGCCGCTAGGCCGAGAAGCGCCG
ACCGCCGGTCCTTGGCCGGGGCGACCTGCACGCGCTTTGCCGCCGCGGGCGAGGCGTTGGCAGATTGCGGCACCGCCGCGGCGGGCTTGAGGCCGACCAC
ACTGGAGTTCACACCTGCCATGGTCCTGGTAAGATTTCTTGATTAGTTTGGTCTGTGTACTGTGTGTTTGGTTGGCATCAAGGTCAGGGGGTGTGGTGAT
GGTTTTGTTTTTGATCGTGGCCGGGGAATGCCGTGGAGGGAGAATGGGGTTGTGGTGAGCGTGTGGATAGGGTGAGGCTTGC