Detailed information on CNT30251960


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30341737Avena sativaEragrostis tef32.0830.492.41145forward

Expression of CNT30251960

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MAMRGGSSSAGCRPRTTSRARSRCRRGRRRGPCRRGRRRS*

>peptide 2 (72 aa)
EIEGDNAGYKAVQTGPSTRNRDELYHNSEPGTPSSLAETPAQSQGHAQHRHTPLPQIAHGFISTATLLATSS*

>peptide 3 (67 aa)
KLKETMQVTKQYRQAPVLETETSYITTQNQGPRPPSQKRRLNHKATLNTDTHHYHRSHTVLFRQQHY*

>peptide 4 (45 aa)
MAIDGNAGRIFQRWLSPSHHFQSTISVPSWTPPWALSPWKASKLR*

Sequence

>CNT30251960
AGAAATTGAAGGAGACAATGCAGGTTACAAAGCAGTACAGACAGGCCCCAGTACTAGAAACAGAGACGAGTTATATCACAACTCAGAACCAGGGACCCCG
TCCTCCCTCGCAGAAACGCCGGCTCAATCACAAGGCCACGCTCAACACAGACACACACCATTACCACAGATCGCACACGGTTTTATTTCGACAGCAACAT
TATTAGCTACTAGCAGCTGAAGCAGAGGATGACGACGACGACGACGACGATGGGGAGGAACTTGTCCCCCCGGACTTAATCCATGGCGATCGATGGCAAT
GCGGGGAGGATCTTCCAGCGCTGGTTGTCGCCCTCGCACCACTTCCAGAGCACGATCTCGGTGCCGTCGTGGACGCCGCCGTGGGCCTTGTCGCCGTGGA
AGGCGTCGAAGTTGAGGTAGATGTTGTTCACCATGCGCACGCAGCGGAAGCC