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Detailed information on CNT30251851


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 1e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696202Avena sativaOryza sativa50.8755.6188.51496forward
CNT30369254Avena sativaOryza glumipatula43.941.4789.25428forward

Expression of CNT30251851

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQREWMTSSSRFLAKVSGSAERPAVSQP*

>peptide 2 (35 aa)
MVMRPSPKGEALEAFTGVPAIAGEESAMVEAAIAR*

Sequence

>CNT30251851
GAAAATTCAGAGATCTTCTGCATGTATTGACATTCAGAGAAACCAATAATAATTAAGCAGAAGAAGAAAAGATGCCTTGATGAATAACCATAAACACCAT
GATCTTTAGTGTACAACACCAACTCCTCATCTCGACTCGCCTTAACATGATCTATCAGTGACGACACACACATGCAGCAGCAGCAGCATTCAGCAATGAA
GTGGTCGGCCAAGCGCGCGCACGACGCAGCACACGCTAGAGGTTGAGCTTACTAATAAGCTCTTACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCATG
CGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGCCGAGGGGGTCGAAGCTGCCTCCGGGGTAGAGCGGGTCGACGATCTCACCGAGCGGTCCACC
GGCGACGCGGTAGCCCTCGACGGCGCCCATGAGCACGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGGGCGTGCACGAGGCTGGGGTTGCCGAGGTAG
TCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCTGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGC
CGAGGGCGCCGAGCATGGCCCAGCGGGAGTGGATGACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGGCCGGCGGTGTCCCAGCC
GTAGTCGCCGGGGAACTCGCCGGTGAGGTAGAGCACGCGGTCGGAGCCGTACCAGGGGCTGCCGGACGCGGACACCTTGGGCTTGGCGGCCGTCTTGCGC
ATGGTGATGCGGCCCTCGCCGAAGGGGGAGGCCCTGGAGGCCTTCACGGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTGGAGGCTGCCATTG
CTCGCTAGTCTGAGGTGAGGTGCTTCGAGTGAGCTCTCAGGTAGTAGTAGTAGATGGTGGTGTGTGTTGGTGCTG