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Detailed information on CNT30251359


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-130

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186790Avena sativaSecale cereale76.1677.1390.21725forward
CNT30665098Avena sativaTriticum dicoccoides65.3476.7993.41622forward
CNT30685008Avena sativaTriticum urartu65.3464.6695.34622forward

Expression of CNT30251359

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQREWMTSSSRFLAKVSGSAERPAVSQP*

>peptide 2 (36 aa)
MVMRPSPKGEALEAFMGVPAIAGEESAMVEAAICSL*

Sequence

>CNT30251359
AGGTTGTTCGGTGAAAACTTAAACTGCTTGGACTTTCAGAAAGTTCAGAGATCTTAAGTAGTATTGACATTCAGAGAAACCAATAGTTAAGCAGAAGAAG
AAAGATTCCTTGATGAATAACCATAAACACCATGATCTTTAGTTGACGACACACATGCAGCAGCAGCATCATTCAGCAATGAAGTGGTCGGCCAAGCGCG
CGCACGCAGCACACGCTAGAGGTTGAGCGAACTAAGCTCTTACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCG
AGGTGGTCGGCGAGGCCGAGGGGGTCGAAGCTGCCTCCGGGGTAGAGCGGGTCGACGATCTCACCGAGCGGGCCGCCGGCAACGCGGTATCCCTCGACGG
CGCCCATGAGCACGACTTGGCAGGCCCAGATGGCGAGGATGCTCTGGGCGTGGACGAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGAT
CTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGGGCGCCGAGCATGGCCCAG
CGGGAGTGGATGACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGG
TGAGGTAGAGCACGCGGTCGGAGCCGTACCAGGGGCTGCCGGACGCGGACACCTTGGGCTTGCCGGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAA
GGGGGAGGCCCTGGAGGCCTTCATGGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTGGAGGCTGCCATTTGCTCGCTCTGATCGAGGTGAGGT
GTGCTTCGAGTGAGCTCGGGTGGTAGGAGTTGCTGGTGTCTGTTGGTGCTGT