Detailed information on CNT30250699


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30396539Avena sativaTriticum turgidum48.8455.3891211forward
CNT30441074Avena sativaAegilops tauschii47.9282.892.27207forward
CNT3014450Avena sativaZea mays47.6941.7891.75206forward

Expression of CNT30250699

Peptides detected in this lncRNA

>peptide 1 (40 aa)
FHFAEPEVQLILVQHPNMNKTQQQETSSTHTATTPTTHEP*

>peptide 2 (41 aa)
MPWMLSRSTFRCRFAPPLPRPLPPLPRPDIFASLRFSGGDW*

>peptide 3 (47 aa)
PFCRTRGSAHPSTTSKHEQDTTAGDIINTHSYHTNDTRTLTNNNNTR*

Sequence

>CNT30250699
TTCCATTTTGCCGAACCAGAGGTTCAGCTCATCCTAGTACAACATCCAAACATGAACAAGACACAACAGCAGGAGACATCATCAACACACACAGCTACCA
CACCAACGACACACGAACCCTAACCAACAACAACAACACTCGCTAACTTGTTCCATCCCTGAAGACCCCGCGCGCTCGCCCTAGCCTCAGCCCCCGAACC
CGTAGAGGGTGCGTCCCTGGCGCTTGAGCGCGTAGACGACGTCCATGGCGGTGACGGTCTTGCGTCGCGCGTGCTCGGTGTAGGCGCCGGATCGCCGGCT
TGGTGATGCCCTGGATGTTGTCCCGGAGCACCTTCCGATGCCGCTTCGCGCCGCCCTTGCCCAGACCCTTGCCTCCCTTGCCGCGGCCCGACATCTTCGC
TTCGCTTCGCTTCTCCGGTGGTGACTGGTGAG