Detailed information on CNT30250455


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT304621Avena sativaZea mays24.7127.8384.8886forward

Expression of CNT30250455

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LVEFALLEVLVEHAGLCGAGGSSDGEDGR*

>peptide 2 (68 aa)
LLSLLFSRYSSNTLACAEPVAAVTAKTAARPRSADRRSLAGATCTRFAAAGEADHTGVRTCHGPGKIS*

Sequence

>CNT30250455
CTTGTTGAGTTTGCTCTTCTCGAGGTACTCGTCGAACACGCTGGCCTGTGCGGAGCCGGTGGCAGCAGTGACGGCGAAGACGGCCGCTAGGCCGAGAAGC
GCCGACCGCCGGTCCTTGGCCGGGGCGACCTGCACGCGCTTTGCCGCCGCGGGCGAGGCCGACCACACTGGAGTTCGCACCTGCCATGGTCCTGGTAAGA
TTTCTTGATTAGTTTGGTCTGTGTACTGTGTGTTTGGTTGGCATCAAGGTCAGGGGGTGTGGTGATGGTTTTGTTTTTGATCGTGGCCGGGGAATGCCGT
GGAGGGAGAATGGGGTTGTGGTGAGCGTGTGGATAGGGTGAGGCTTGC