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Detailed information on CNT30250097


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30667627Avena sativaTriticum dicoccoides11.3925.6888.1676forward

Expression of CNT30250097

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MVGGPLSPCYIKRWGIGSTWYEVRCSAARRTDIPTDLGF*

>peptide 2 (51 aa)
RALIGGTQPYHGWWAPVAVLYKEVGDRQHVVRGSLQCRSPHRYPYRSRVLA*

>peptide 3 (48 aa)
MDASSSANSGIPAGSCSSSQGAGGLNLMSCLKDIPMLGGITTLSGGRK*

Sequence

>CNT30250097
CGCGCTCTGATCGGGGGCACCCAACCTTATCATGGTTGGTGGGCCCCTGTCGCCGTGCTATATAAAGAGGTGGGGGATCGGCAGCACGTGGTACGAGGTT
CGTTGCAGTGCCGCTCGCCGCACCGATATCCCTACCGATCTAGGGTTTTAGCGTGAGCCGACGGGAAGCTTTGCCACCACCGCACATCCACGCCGTTGCC
CTATTCCCCATGGACGCTAGCAGCAGTGCCAACTCCGGCATCCCCGCTGGCTCCTGCTCGTCGAGCCAGGGCGCAGGAGGTCTCAACCTTATGAGTTGCC
TCAAGGACATTCCAATGCTCGGGGGGATAACTACACTGAGTGGAGGAAGAAAGTAGATCTGGCCTTTGTTGTGCCGAGGTTGACTGGGTTATTGAAACCA
AACAGCCAGTCAAGCCAAAATACCCAGTAAGAGATGATGCTGAGGATCATGCTGCTTGGGAAAAGAGAAAGAGTGAACATGCTCCAGTGGAGCTGGCATA
CTCTATAGATAATCAAAAGTGGGTCAATGCTAACAAAAAGTGCTTGGCCTTTATAAAGAATACGATTGAGAACGCAATTGTGGGCTCAATCGAAGAGTGT
GCCTCTGTTGGGGAGTATCTAGCGAAGATAAATAGTCAGTTTACTGGCTCTTAAAAGATGTATGCCA