Detailed information on CNT30249833


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 1e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30356274Avena sativaLactuca sativa22.5212.8889.2984forward

Expression of CNT30249833

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRWRVAAEACVAMAMAEVVLGNGRTGEATRAR

>peptide 2 (34 aa)
APRRWGRRGRTGTRSCTWSGACCRGLGTAPCAPA*

Sequence

>CNT30249833
GCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTACGCGATCTTGTACTTGGAGCGGAGCCTGTTGCCGAGGGCTAGGCACTGCTCCTTGCGCGCCAG
CTTGAGGAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCC
TCCACCTGCGCCTTGCGGAGGAGGGGAGCGCGAGGGAGACGGCGCGCGGCTTGGAGGAGGGCGACCAGACCGCGGTGATGAGGTGGCGGGTGGCCGCCGA
GGCTTGCGTGGCCATGGCCATGGCGGAGGTGGTTCTTGGCAACGGGAGGACAGGAGAGGCCACACGCGCGCGC