Detailed information on CNT30249555


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604027Avena sativaOryza punctata34.8223.8286.0586reverse complement

Expression of CNT30249555

Peptides detected in this lncRNA

>peptide 1 (57 aa)
RRSPATRAISCRSASCTVERTMPSSCGHAAAAGESSKARVARTARAELLAIVWFAEE*

>peptide 2 (35 aa)
AEEPGNEGDLLSERVLHGGAHDAVELRARCCCWGE*

>peptide 3 (64 aa)
GGARQRGRSPVGARPARWSARCRRAAGTLLLLGRVARRGWPGRPGLSCSPLFGSQRSSSASLGG*

Sequence

>CNT30249555
GCGGAGGAGCCCGGCAACGAGGGCGATCTCCTGTCGGAGCGCGTCCTGCACGGTGGAGCGCACGATGCCGTCGAGCTGCGGGCACGCTGCTGCTGCTGGG
GAGAGTAGCAAGGCGAGGGTGGCCAGGACGGCCAGGGCTGAGCTGCTCGCCATTGTTTGGTTCGCAGAGGAGTAGCAGTGCAAGCTTGGGCGGTTGAGCT
TGAGCTGAAACTTGAGTGGAGGTTGGCTGGCACAGATTGACTGACTT