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Detailed information on CNT30249180


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30620323Avena sativaCajanus cajan20.036.4981.9116forward

Expression of CNT30249180

Peptides detected in this lncRNA

>peptide 1 (97 aa)
TMHAKDGLCGKIHLHVHRLKQASTAMHVLYMVRVLLEEVWEVEDVEEEVGPDGARDAAEEEPSGELRPALGGLQLVGLLLASREGERWRGGGRRRTW*

>peptide 2 (48 aa)
MARWRATPYMVRTTLRMVTRPMAPRAPAWPCTGVLRSGPVSAKGPTRR*

>peptide 3 (32 aa)
PPCMQKMDCAERFIYTYIGSSKHLQPCMYCTW*

Sequence

>CNT30249180
CCACCATGCATGCAAAAGATGGATTGTGCGGAAAGATTCATTTACACGTACATAGGCTCAAGCAAGCATCTACAGCCATGCATGTACTGTACATGGTAAG
AGTTCTACTTGAAGAAGTATGGGAGGTCGAGGACGTAGAGGAGGAAGTAGGCCCAGACGGCGCCAGAGACGCCGCCGAAGAAGAACCCTCCGGTGAACTG
CGCCCAGCCCTCGGCGGTCTGCAGCTTGTCGGCCTCCTTCTTGCGTCCCGTGAGGGTGAGCGATGGCGCGGTGGAGGGCGACGCCGTACATGGTGAGGAC
TACGCTGAGGATGGTGACGAGGCCGATGGCGCCGAGAGCGCCGGCCTGGCCGTGCACGGGGGTGTTGCGGAGCGGGCCGGTGAGCGCGAAGGGGCCGACG
AGGAGGTAGCCGTGGGCGAGGCCTCCTGGTCGTGAGCGAGGCGCCAGACAGGCCCCTCGGCTTGGAGCACACCAAGCTGCTGCTGCTGCTCTTCAGCAGC
TGGCTCGCCATGGGAGGAGCATACGCGGTGGCCATCGTCTTCCCCTCTGCTTCACGCGCTAGCTCAACTCTGCTGGAAC