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Detailed information on CNT30247547


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7G794|LOX3_ORYSJ, E-value = 4e-134

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT304788Avena sativaZea mays27.5958.4384.19253forward
CNT30721720Avena sativaTriticum spelta29.2349.8186.19268forward
CNT30344859Avena sativaEragrostis tef58.3480.8279.63535forward

Expression of CNT30247547

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MVVVVKDVELVVVDSLLNGEALEALSDVSLGDGAGVVAVLAGIKSTLGWELLHQFS*

Sequence

>CNT30247547
TTTATTTATTTGTTTACTTACCTCTTGATTAGATCGTCCGGGAGAGCCTGCTCCGCGAAGTTCCAGTTCTTGTAGGTGACGGATGACATCTCCATGGCGT
ACTTGCGCTGAAATACGGTTGTCTCGATGATCCCGCCGGCATTGACGAGCAACTCCCGTGCCCGTGAGTTGATGTTCATCGTGTCACGGTAGTGTGGGTG
AAGGAGCTTGTGCACCGGGTGGGTCACACTCAGCTGCCGATTTGTGGCGATAATGAAGGGCTCCATCACGGCGTGCGTGTGGAGCCAGTGGCTGATCAGT
TGGTGCCAACCGTAGTCGTTCACGCAGACATAGGCCTTGGCGAGCTGCCATATCCAGGCCTCGACGCCGGTGGAGGATGGCGTGTACACGGTGCTCTTCG
GGGTCGTGAGGTCTCCCTGGATTAGAGGTGTGCTCAGCTCGATGGCGATTGGCGCCAGCGTGCCATCACCTCTCAGGAAGAGCAGAGTCCTCGTCGCGTA
GAGGAAGGTGTCATCAAGGTTGTTGAGCTTGATGAGGTATGGCATCATATGGTCGTGGTGGTCAAGGATGTAGAGCTTGTTGTTGTCGACAGCCTGCTGA
ACGGTGAGGCCCTCGAGGCTCTTTCCGATGTGAGCCTCGGTGATGGTGCTGGTGTGGTCGCCGTACTTGCTGGGATCAAGAGTACTCTTGGGTGGGAACT
CCTGCACCAATTCAGTTAATTAATTACCCCATTAGTTCTCGGCGAGTAGAAAACTTATTACGAAAATGCAACTCCATATAGAAAAATTTCACTAATCTCC
ATCGCAAACTACAATTGGTTGACCGATGTGTTGACTCACGGTGACACGTGTGATCATCATCGGGTTCACTCCTGCAAGAATCTCCCTCGCAAACTCATCA
TCAGTCATCCACGCTTT