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Detailed information on CNT30243876


BLAST search results

BLAST vs Swiss-Prot:
sp|P55308|CATA2_HORVU, E-value = 9e-168

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692473Avena sativaOryza sativa28.5517.4485.58215forward
CNT30678563Avena sativaSetaria viridis7.727.6287.9358forward
CNT30519927Avena sativaSetaria italica33.4714.6990.08252forward
CNT30640148Avena sativaNymphaea colorata20.456.9783.12154forward
CNT30616919Avena sativaSesamum indicum16.237.7783.61122forward
CNT30185311Avena sativaSecale cereale31.4716.8495.36237forward
CNT30304171Avena sativaTriticum aestivum50.465391.32380forward
CNT30223811Avena sativaHordeum vulgare22.1878.0484.43167forward
CNT30592095Avena sativaMusa acuminata18.5947.4682.86140forward
CNT30552865Avena sativaOryza glaberrima23.2464.5892175forward
CNT30663894Avena sativaTriticum dicoccoides23.647.5783.71178forward
CNT30139766Avena sativaLolium perenne18.3328.1695.65138forward
CNT302263Avena sativaZea mays27.7618.7185.65209forward
CNT30228948Avena sativaAnanas comosus15.9441.188.33120forward
CNT30347744Avena sativaEragrostis tef50.3324.286.81379forward
CNT30369978Avena sativaOryza glumipatula28.6928.7686.11216forward
CNT30575497Avena sativaOryza barthii29.8817.9486.67225forward
CNT30116279Avena sativaOryza nivara58.4322.1782.05440forward

Expression of CNT30243876

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MAVVLASDEGGLVVHEAADAAGGLPVELDVSCLAVACDEGVCVDPESVHVAVVGGDADVVEEEEEGV*

>peptide 2 (51 aa)
ARWVRLPERGVAGRVVVDLLVAMHEVHGAVVVVVLESALGRVDGEHEVVWA*

>peptide 3 (45 aa)
MPTSSKRKKKVCRDSGRWDRKSKTRQYSWTWDLGLGLKAWMTSGNL

>peptide 4 (37 aa)
MRQLTPQVGFQWNLTYRALPSRVTKVYVLTPNPSMWR*

Sequence

>CNT30243876
GCTCGGTGGGTCCGCCTGCCGGAGCGGGGCGTGGCGGGACGGGTAGTAGTCGACCTCCTCGTCGCGATGCATGAAGTTCATGGCGCCGTCGTAGTGGTTG
TTCTTGAATCCGCACTTGGGCGCGTTGACGGGGAGCATGAGGTAGTTTGGGCCTAGGCGGTAGCGCTGCGTGTCGGCGTAGGCGAAGACCCTACACTGCA
GCATCTTGTCGTCGGAGTAGTAGATTCCGGGCACGACGAGGCCGGGGCCGAAGAAGTTGTCGACGTTGCGGTCGAGGACGAGCCGGCCGACTGGTTGCAA
AGGGACGAGGTCCTCGGGCCATGTCTTGGTGTCGTCGAGCGGGTCGAAGTCGAATTTATCTTCTTCGTCCGGGTCAATGACCTGCACGAAGAGCTTCCAC
TCGGGGAAGTTTCCGGCGTCGATGGATTCGTAGAGGTCCTGTGTGGCATGGCTGTGGTTCTTGCCTCCGACGAGGGTGGCCTCGTCGTCCATGAGGCAGC
TGACGCCGCAGGTGGGCTTCCAGTGGAACTTGACGTATCGTGCCTTGCCGTCGCGTGTGACGAAGGTGTATGTGTTGACCCCGAATCCGTCCATGTGGCG
GTAGTCGGTGGGGATGCCGACGTCGTCGAAGAGGAAGAAGAAGGTGTGTAGGGACTCGGGGAGGTGGGATAGGAAGTCGAAGACGCGCCAGTACTCCTGG
ACGTGGGACTTGGGGTTGGGCTTGAAGGCGTGGATGACGTCGGGGAACTTGAT