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Detailed information on CNT30243771


BLAST search results

BLAST vs Swiss-Prot:
sp|A1EA46|RK16_AGRST, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Avena sativaOryza sativa100.0927.6192.371154forward
CNT30641762Avena sativaNymphaea colorata27.239.0587.58314forward
CNT30550215Avena sativaIpomoea triloba22.25.5982.81256forward
CNT30405603Avena sativaBeta vulgaris28.7943.4688.25332forward
CNT30196572Avena sativaPisum sativum26.1129.9882.06301forward
CNT3048584Avena sativaPrunus dulcis18.6566.7788.37215forward
CNT30185636Avena sativaSecale cereale53.0839.4895.75612forward
CNT30293259Avena sativaTriticum aestivum77.9763.8993.66899forward
CNT30540371Avena sativaBrassica napus28.4554.385.06328forward
CNT30555950Avena sativaOryza glaberrima100.0976.1792.21154forward
CNT30442098Avena sativaAegilops tauschii57.94100.9195.51668forward
CNT30656274Avena sativaTriticum dicoccoides43.45100.695.61501forward
CNT30311863Avena sativaCamelina sativa21.1614.9487.7244forward
CNT3060130Avena sativaArabidopsis lyrata26.6333.4886.32307forward
CNT3083474Avena sativaBrassica juncea28.459.8285.06328forward
CNT30598237Avena sativaFraxinus excelsior10.8420.3386.4125forward
CNT30447455Avena sativaSaccharum spontaneum40.4264.992.92466forward
CNT30134355Avena sativaLolium perenne73.4633.6493.74847forward
CNT30229832Avena sativaAnanas comosus31.4830.8786.5363forward
CNT30655378Avena sativaRosa chinensis29.2322.6988.13337forward
CNT30689030Avena sativaTriticum urartu99.5725.3594.951148forward
CNT30620547Avena sativaCajanus cajan13.0147.7786.67150forward
CNT30357951Avena sativaLactuca sativa29.2335.8187.24337forward
CNT30411335Avena sativaPapaver somniferum34.8746.5887.81402forward
CNT30574575Avena sativaVitis vinifera28.9721.8988.62334forward
CNT30585636Avena sativaEchinochloa crusgalli67.4813.5593.06778forward
CNT30116873Avena sativaOryza nivara17.1728.4195.96198forward
CNT30604550Avena sativaOryza punctata41.8922.0490.27483forward
CNT30557814Avena sativaPanicum hallii22.9825.6392.83265forward
CNT30550799Avena sativaOryza brachyantha30.8826.4390.17356forward
CNT30336889Avena sativaCynara cardunculus29.2339.3285.76337forward
CNT30724130Avena sativaLupinus angustifolius13.2745.8186.93153forward

Expression of CNT30243771

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RCVVIIADYYTVFTFELFTCTYNYSSNYFGSF*

>peptide 2 (33 aa)
MHSARAISFPPRRPAILTLTPLISAFLVNSMAFF

>peptide 3 (35 aa)
MQKDERNIVFSERKKGRFFIFNTPLSFRGSIFLIE*

Sequence

>CNT30243771
CGCTGCGTTGTCATCATAGCGGATTATTATACCGTCTTCACATTTGAACTCTTTACATGTACGTACAATTACAGCTCGAATTACTTCGGATCTTTCTAGG
GGCATTCGGGGCAATGCGTCTTTGATTACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCTGCAGCTCCTATGACTCGAATACACATCA
ATTTTCGAGCTCCACTATTATCTGCTACGTTTAAAAGGGTCTGATGTTGAATCATATTATTTTGATTTCCATTTGTTATTTCAATGCAAAAGGATGAAAG
AAATATTGTCTTTTCAGAAAGAAAAAAAGGGCGTTTTTTTATCTTCAATACTCCTTTGAGTTTTAGGGGTTCTATATTTCTAATCGAATAAATTGACTTC
GTATAGGCATTTTACTGGCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCGGATACCCCCCCCATTTCATAAAGTATACGACCTGGTTTAACAACGGC
TACCCAATATTCGGGGGACCCCTTTCCTGAGCCCATACGTTTTTCCGTCGGTCTTAGTGTAACGGGTTTGTCGGGAAATATACGTACCCATATTTTTCCA
CCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCCGTGATCCAAGCAGGTTCAAGTGCTTGAAGAGCATATCTACCAAAAC
AAATACGATTGCCTCGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGCGAAATCTGGTTCTTTTGGGGTTATACATAGCAATTATATTAAATGA
TTTATCAATTTTCATTAAATTTTATAGAAAGAAAGAGGTAGAATTTCTTGTTTTTTTCAGGGATTTCAGGAAAAAAAGTCTCTTGTCATTTTTTATTCTA
TCACTGGACAGAATGCGAAGAGAAGATTAGTTATTCTTCGTCTACGAATATCCAAATTTTTACACCTAATACTCCATAGATAGTTCGAATTGGATAGCAG
CAATAATCAATTTTAGCGCGAATTGTTTGGAGGGGGAGTCTACCCTTTTTGATGCATTCGGCACGTGCAATTTCTTTTCCTCCGAGACGACCCGCAATTT
TGACTTTGACTCCCCTTATATCCGCTTTTTTAGTTAATTCAATGGCTTTTTTC