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Detailed information on CNT30241486


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 5e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673198Avena sativaSetaria viridis29.1947.3791.67108forward
CNT30521234Avena sativaSetaria italica29.1914.9491.67108forward
CNT30532753Avena sativaEucalyptus grandis23.2434.6886.0586forward
CNT30384456Avena sativaTriticum turgidum50.8135.1494.15188forward
CNT3011150Avena sativaZea mays29.1912.7788.89108forward
CNT30704201Avena sativaPrunus avium23.2433.283.7286forward
CNT30318832Avena sativaAsparagus officinalis29.195.2988.89108forward
CNT30496965Avena sativaDigitaria exilis29.1931.7692.59108forward

Expression of CNT30241486

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MVQEGQKRRESLIQQAFRSCRVGPGWEQELEQEPPLGEGRGEGVEELALQAVVGRRRVGAVQVPLPRRVADVLQVEVHALLSVLGHHRRAP

Sequence

>CNT30241486
TGAAGCTATCATCCATTCAATTACTGATACACATAGTACAGGAATCAGATAGTATCAACAACGCATACAGATAAGGGGGGATCGGTATCGGATCCATGGT
ACAAGAAGGGCAGAAAAGGAGGGAGAGCCTGATCCAACAAGCTTTTAGATCTTGCCGCGTGGGCCCGGGGTGGGAGCAGGAACTTGAGCAGGAGCCCCCG
CTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGGCGCGTCGGAGCCGTACAGGTCCCACTGCCCCGTCGTG
TTGCCGATGTCCTCCAGGTCGAAGTACACGCTCTTCTCTCCGTACTTGGCCACCACCGCCGCGCCCCGGA