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Detailed information on CNT30240506


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 5e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283510Avena sativaTriticum aestivum30.0932.2797.41232forward
CNT30655772Avena sativaTriticum dicoccoides30.0928.4397.41232forward

Expression of CNT30240506

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICISAAVGGHLRALRRRRWWRRRGRVWVGWRSE

Sequence

>CNT30240506
GTAATCCAGAATGATATCATATAGCTGAAACCAAAATTTAAACTCGCATCGCATCATCTGAGTAATAGACGAACAAACATCCAGGAAACATACTACTCCA
GGTTCAGTTTTAACGACAAACGGTAGACATATCTAAATGAGATGAACCAACAGCTCAATTGAGTTCTCGATAGGTAGGGTAAAGTAAAGCATAGCGAACG
CTGAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAAGTCCCGGCGCCGC
ACTCGGCGTTGGGGCACTCCTTCCTCAGCCTGGTGACCTTGCCGGTAGCGTCGTCGACCTTGTAGAACTGGAGGAGGGCGAGCTTCACCTTCTTGTGCTT
GTGCTTTTGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCTCCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATG
TTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCT
TGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTCGGCGGCGGTGGGGGGTCA
CCTCCGCGCGCTGCGGCGGCGACGCTGGTGGCGGCGGCGGGGTAGGGTTTGGGTTGGGTGGAGGAGTGAAG