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Detailed information on CNT30237965


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538455Brassica oleraceaBrassica napus100100100307forward
CNT3076575Brassica oleraceaBrassica juncea10097.7796.42307forward
CNT30263689Brassica oleraceaBrassica rapa10010096.42307forward

Expression of CNT30237965

Peptides detected in this lncRNA

>peptide 1 (62 aa)
SSLVTRACNPSGDNKAMGRWADLFGPDSERLSTGLPVPSRESSVRTRAKACGSDTLRAEETA*

Sequence

>CNT30237965
GTCGAGCCTGGTAACGCGGGCTTGTAATCCAAGTGGGGACAATAAGGCGATGGGACGTTGGGCCGATCTCTTTGGGCCTGACTCGGAAAGACTATCTACT
GGCCTGCCCGTTCCAAGTCGGGAGTCGAGTGTTCGGACTCGAGCGAAGGCTTGTGGTTCGGACACTCTTAGAGCGGAGGAGACTGCGTGAGGCTGGTTTC
ACAGAGCAGCGTCCACCTCCCGTTTTCGACGGTGGAAGGATTACGGGCCGGTGCCTCCCGAGCCCACTATGACCCAATAAGCCGGCTCCAATTGGACCAT
CACTTTT