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Detailed information on CNT30237791


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541469Brassica oleraceaBrassica napus94.5414.7195.11225forward
CNT30310337Brassica oleraceaCamelina sativa39.55.6391.4994forward
CNT3083474Brassica oleraceaBrassica juncea93.76.6895.96223forward

Expression of CNT30237791

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SPINLIPKNLLKFLPFFSYRYTYTKICRIFSKA*

Sequence

>CNT30237791
TTCTCCGATTAACTTAATACCTAAGAACTTACTAAAATTTTTACCTTTTTTCTCCTATAGGTATACGTATACAAAAATATGTCGAATCTTTTCAAAAGCA
TGACCTAAAATTAAAAAAAATCTTTAGTATCTAAACAAAATCGAACCATACCGTTCAGAAGTGATTCATAAAGAAAACTTTCATTAATTCATTTTTTGTC
TTTAATTTTATTCGGGGTAAAAAATTGGACATTTATTT