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Detailed information on CNT30237776


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30542251Brassica oleraceaBrassica napus100100100307forward
CNT3059672Brassica oleraceaArabidopsis lyrata100.98100.9887.42310forward
CNT30478499Brassica oleraceaArabidopsis halleri100.98100.9888.71310forward

Expression of CNT30237776

Peptides detected in this lncRNA

>peptide 1 (62 aa)
SSLVTQACDPSGDNKVMGHWADLFGPGSDGLSTGLPIPSRELSVWTRAKACGLNALRAEETA*

Sequence

>CNT30237776
GTCGAGCTTAGTAACGCAGGCTTGTGATCCAAGTGGAGACAACAAAGTGATGGGACATTGGGCTGATCTCTTTGGGCCGGGTTCGGATGGGCTATCTACT
GGCCTGCCCATTCCAAGTCGGGAGTTGAGTGTTTGGACTCGAGCGAAGGCTTGCGGTTTGAACGCTCTTAGAGCGGAGGAGACTGCGTGAGGCTGGTTTC
AGAGAGCAGCGTCCACCTCCCGCTTTCGACGGTGGAAGGATTACGGGCCGGTGCCTTCCGAGCCCACTATGACCCAATAAGCCTGCTCCAACTGGACCAT
CACTTTT