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Detailed information on CNT30237226


BLAST search results

BLAST vs Swiss-Prot:
sp|P22197|ALFC7_ARATH, E-value = 5e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524157Brassica oleraceaSetaria italica24.949.2785.84113forward
CNT30639585Brassica oleraceaNymphaea colorata17.4432.9284.8179forward
CNT30377016Brassica oleraceaArabidopsis thaliana51.6664.2988.03234forward
CNT30381342Brassica oleraceaManihot esculenta26.4914.8585.83120forward
CNT30708950Brassica oleraceaGlycine max18.3221.586.7583forward
CNT30439071Brassica oleraceaAegilops tauschii22.7430.8488.35103forward
CNT30255936Brassica oleraceaAvena sativa19.8724.4687.7890forward
CNT30662744Brassica oleraceaTriticum dicoccoides28.4824.1686.05129forward
CNT30136123Brassica oleraceaLolium perenne25.1721.0385.09114forward
CNT307142Brassica oleraceaZea mays24.949.0384.96113forward
CNT30217653Brassica oleraceaKalanchoe fedtschenkoi24.2842.1585.45110forward
CNT30348317Brassica oleraceaEragrostis tef23.1815.6587.62105forward
CNT30477126Brassica oleraceaArabidopsis halleri64.0271.7888.97290forward
CNT30481517Brassica oleraceaChara braunii21.1931.7985.4296forward
CNT30570192Brassica oleraceaVitis vinifera19.8720.7483.3390forward
CNT30104100Brassica oleraceaOryza rufipogon22.7418.8683.5103forward

Expression of CNT30237226

Sequence

>CNT30237226
TTTCTAGAGAATAATTTTCAATTGTAAATGATCAAAGATAGATAACTTCAATATATAAAAAACTTATTAAAAGGAGTAGGTAATGCAAATTCAGCAGAGA
AAATAAGTGATTTGACATGATAATAACAACCATACTCAAAAACAAATGTAGTTAAAACACTTGCTTCGTCTCCTTTAACAGCAACATTGTTGTCTTCAGT
AGGTGTAGCCTTTGACGAACATACCCTCCTTAGCCTCTTCAGACTCACCTTCTCCGGTGTATTTTCCGAGCTGAGCCAACGAATTGGCCTTGGCTCGAGT
CAAGAGAGTGGTCTGAGCTGCGTTCACGTTTTCAGGCAAGTGTTCTGAAGAGCACGTGCGTAGGAGAAGGACACGTGCCACGGGTTTGGTGCCTGGTTCA
TGGCGTTCAGGTTCAACGTTGCCTCCAACTCAGACTGTCCTCCCGACAAGAAC