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Detailed information on CNT30237104


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Brassica oleraceaOryza sativa22.2214.4984.7272forward
CNT30678559Brassica oleraceaSetaria viridis60.4925.7987.24196forward
CNT30521842Brassica oleraceaSetaria italica60.1921.1387.18195forward
CNT30517675Brassica oleraceaJuglans regia33.3317.8888.89108forward
CNT30727923Brassica oleraceaCorchorus capsularis33.339.1293.52108forward
CNT3071006Brassica oleraceaQuercus suber47.5331.8879.87154forward
CNT30379324Brassica oleraceaManihot esculenta60.1920.1984.1195forward
CNT30403515Brassica oleraceaBeta vulgaris59.2674.7183.85192forward
CNT30710214Brassica oleraceaGlycine max92.999.0181.06301forward
CNT30283673Brassica oleraceaTriticum aestivum33.3335.0687.04108forward
CNT30220716Brassica oleraceaHordeum vulgare33.3347.3787.04108forward
CNT30394677Brassica oleraceaTriticum turgidum43.2148.7885140forward
CNT30555279Brassica oleraceaOryza glaberrima60.1962.583.08195forward
CNT30435344Brassica oleraceaAegilops tauschii37.0438.5985.83120forward
CNT3059767Brassica oleraceaArabidopsis lyrata88.2740.3487.76286forward
CNT3075316Brassica oleraceaBrassica juncea59.2664.6592.19192forward
CNT30265527Brassica oleraceaBrassica rapa59.2631.1791.67192forward
CNT30611949Brassica oleraceaArabis alpina27.4725.7293.2689forward
CNT30445136Brassica oleraceaSaccharum spontaneum47.2221.7385.62153forward
CNT30136247Brassica oleraceaLolium perenne33.3335.2986.11108forward
CNT3010240Brassica oleraceaZea mays55.5619.1985.56180forward
CNT30606894Brassica oleraceaGossypium raimondii33.6429.8688.99109forward
CNT30655223Brassica oleraceaRosa chinensis19.1424.4190.3262forward
CNT30210906Brassica oleraceaHelianthus annuus49.6961.6980.12161forward
CNT30716286Brassica oleraceaMalus domestica golden57.4114.2483.87186forward
CNT30689747Brassica oleraceaTriticum urartu33.3335.1887.04108forward
CNT30721658Brassica oleraceaTriticum spelta55.2543.1385.47179forward
CNT30619808Brassica oleraceaCajanus cajan33.0217.9889.72107forward
CNT30597159Brassica oleraceaOryza meridionalis60.4927.0785.2196forward
CNT30360524Brassica oleraceaLactuca sativa54.3227.4683.52176forward
CNT30704384Brassica oleraceaPrunus avium33.3319.3982.41108forward
CNT30106559Brassica oleraceaOryza longistaminata39.256.783.46127forward
CNT3024757Brassica oleraceaPopulus trichocarpa34.2642.5389.19111forward
CNT30147962Brassica oleraceaBrachypodium distachyon95.0690.8683.12308forward
CNT30104256Brassica oleraceaOryza rufipogon93.5223.3183.5303forward
CNT30575645Brassica oleraceaOryza barthii60.192386.15195forward
CNT30117821Brassica oleraceaOryza nivara86.7325.3482.92281forward
CNT30174517Brassica oleraceaVigna angularis20.9933.8385.2968forward
CNT30724701Brassica oleraceaLupinus angustifolius32.19.2190.38104forward
CNT3040082Brassica oleraceaMarchantia polymorpha33.0225.4884.11107forward

Expression of CNT30237104

Sequence

>CNT30237104
ACCTGAGAGACGAGACGGTTAAGGTTGGTGTAGGTTGGCCTCTCAATGTTTAGGGAACGTCTGCAGATGTCGTAGATAGCTTCATTGTCGAGGAGGATAG
AGACATCAGTGTGTTCCAAGAGCGAGTGAGTGGAGACTTGTGGAGATGGGTAAACAGTGAACCCGAGCTTGGACTTTTTCCCGTAGTCGACAGAAAGTCT
CTCGAGGAGGAGCGACCCAAGACCAGACCCAGTTCCTCCACCAACAGCGTTGAAGACAAGGAAGCCTTGGAGACCAGTGCAGTTATCAGCGAGCTTTCTG
ATTCGGTCCAAGCACAGATCAACA