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Detailed information on CNT30236827


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3076072Brassica oleraceaBrassica juncea69.6949.5694.97338forward

Expression of CNT30236827

Peptides detected in this lncRNA

>peptide 1 (72 aa)
FVPLKVLWNLSKSKWVKPKVPAHICNPLAQKVKLIKTATNLKVRALCHQKGVSIISLSRDTYKGFRSAQETE*

>peptide 2 (54 aa)
MISFSFDTHLTELRDVICVPRSRTVEVSWSWLAGHPVSSHSDTANVPGVGEWNSG

Sequence

>CNT30236827
CTTTGTACCTCTCAAGGTTCTCTGGAACCTCTCCAAGTCCAAGTGGGTCAAACCCAAAGTCCCTGCACATATTTGTAACCCGTTAGCTCAAAAAGTGAAA
CTTATCAAAACTGCCACCAATCTTAAAGTCAGAGCCTTATGTCATCAAAAAGGGGTTTCAATCATTTCTCTCTCTAGAGACACATATAAAGGGTTTCGTA
GTGCGCAGGAAACAGAGTAAAGGAGACTAATTTCCGAACGTGAAGCTACGGTAACTTAAAGACTGAAGCTTTAAACAGCCTTCTAATGATGCAATCAAAG
CCAATATATAATCATCAAAAATGATTTCATTTTCTTTTGACACACATCTAACAGAGTTGAGAGATGTGATTTGCGTACCCAGGAGCAGAACCGTCGAGGT
AAGCTGGTCTTGGCTCGCCGGGCATCCAGTGAGCAGCCATTCTGATACGGCCAACGTTCCCGGCGTTGGGGAGTGGAACTCCGGC