Detailed information on CNT3023551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382472Populus trichocarpaManihot esculenta23.3122.6291.369forward
CNT30526259Populus trichocarpaPhaseolus vulgaris37.8436.7285.71112forward
CNT30724620Populus trichocarpaLupinus angustifolius20.612086.8961forward

Expression of CNT3023551

Peptides detected in this lncRNA

>peptide 1 (34 aa)
AEPGNVGLDLLEVIGTLIQLIWLGLDLLDSGLSV*

Sequence

>CNT3023551
GCTGAGCCTGGTAACGTGGGCCTGGATCTGCTTGAGGTGATAGGAACATTGATTCAGCTCATATGGTTGGGTCTGGATCTGCTTGATTCTGGCTTGTCTG
TTTGAAGCCAGGAGTTGAACCATGGCATCCTAGTGAAGACATGGGTGTCATGGCTCCTAGAGTGGAGGGTACAACGTGAGGCTGGTTTCACAGAGCAGCG
ACTACCTCCCTCTCCCGGCAGTGAAAAAGATAACGGGTCGGTGCTGTCTAGATCCAAAATGGCTTAATGGGCTGGTCTAATTGGACCATCACTTTT