Detailed information on CNT30235444


BLAST search results

BLAST vs Swiss-Prot:
sp|P27985|RBS2_BRANA, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508075Brassica oleraceaNicotiana attenuata21.1912.3987.7257forward
CNT3083811Brassica oleraceaVigna radiata36.87.5984.8599forward
CNT30540863Brassica oleraceaBrassica napus33.4615.1388.8990forward
CNT30146145Brassica oleraceaMedicago truncatula35.699.0483.3396forward
CNT30613226Brassica oleraceaArabis alpina51.31294.93138forward
CNT3030551Brassica oleraceaTheobroma cacao21.1915.0487.7257forward

Expression of CNT30235444

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LQLEFNTRNPLVAEKVVNFLTQFNFGKVRKVREGLKLLLSNWWPHLRIVFPLTLPPLLTMEVTTAAEESIE*

Sequence

>CNT30235444
CTCCAACTCGAATTCAACACAAGGAATCCACTTGTTGCGGAGAAGGTAGTCAACTTCCTTACCCAATTCAACTTCGGTAAGGTCAGGAAGGTAAGAGAGG
GTCTCAAACTTCTTCTTTCCAATTGGTGGCCACACCTACGAATCGTATTTCCACTAACTCTTCCTCCGTTGCTAACGATGGAGGTAACAACAGCGGCGGA
GGAGAGCATAGAGTAAGCCATGACTACTTCTTCTTCCTTCTCTTAACTCTTACTGTTAGTCTATTGCTT