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Detailed information on CNT30235237


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 4e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380492Brassica oleraceaManihot esculenta41.831.6983.62232forward
CNT30200456Brassica oleraceaPisum sativum40.957.1884.58227forward
CNT30355896Brassica oleraceaLactuca sativa42.8840.4884.45238forward

Expression of CNT30235237

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MVSKILQRSLTSDNSLNKESKHREHSQSSVLDLLHLQLREGLWVSSQTQRVKAATWVKQVLGLSQRPISCDSAAIAVEC*

Sequence

>CNT30235237
TTTTGTAGAAATAACTTTTGCAATTGAATGATAACAAAAAAACATAAATCCATTTCCATTTAGTTCTACGACACAGTTGATAAGACAAAGAGTTATTGGA
TTAATGGTAAATCATACAAATACTTGCAAATTTTACATCTAAACAACATCTCTTTCTCCTCTTACACTCACAAGAAGCAAATACTGAAGCAAATTACAGA
TAAAAACATCGCTCACTTTCCGGGAACGAAGTTGGTAGCAAAGGCCCATGCATTGTTGTTAACTGGATCAGCCAAATGGTCAGCAAGATTCTCCAAAGGT
CCCTTACCAGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATAGCCAATCTTCCGTTCTTGATCTCCTTCACCTTCAACTCCGCGAAGGCCT
CTGGGTCAGTAGCCAAACCCAACGGGTCAAAGCTGCCACCTGGGTAAAGCAAGTCCTCGGCCTCTCCCAACGGCCCATCTCCTGCGACTCTGCGGCCATT
GCGGTTGAGTGCTGAGCGAAATAAAACGTTTATTGGTTGTTGTTTATGAGCCAAG