Detailed information on CNT30234846


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223508Brassica oleraceaHordeum vulgare21.258.5394.1251reverse complement
CNT30553994Brassica oleraceaOryza glaberrima21.257.1794.1251forward
CNT30153321Brassica oleraceaPrunus persica22.9211.3494.5555reverse complement
CNT3025558Brassica oleraceaPopulus trichocarpa22.926.7992.7355forward
CNT30150988Brassica oleraceaBrachypodium distachyon21.252.9294.1251forward
CNT30577653Brassica oleraceaOryza barthii21.258.4292.1651reverse complement

Expression of CNT30234846

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLRPRSKSCISTKPLMTTNLSLLACFGTRTRSM*

Sequence

>CNT30234846
CTGAGATTGATGTCACGGTTCTATAGTTACAGAATCAGAAACTTATCCAGCAATTAAACTTACCTTAACTTTTCGAGGAATCCTTCAGCAGTGGTTGTGA
ATAACTGATTTTTCTCAGTACGATGTTGAGACCAAGGTCCAAGAGTTGCATCTCAACCAAACCTCTTATGACGACCAATTTATCTCTGTTAGCCTGCTTT
GGAACCAGAACCAGATCCATGTGACGGACTATGGTTTTTT