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Detailed information on CNT30234706


BLAST search results

BLAST vs Swiss-Prot:
sp|P09364|MATK_SINAL, E-value = 4e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30263944Brassica oleraceaBrassica rapa97.6213.3998.48328forward
CNT30718041Brassica oleraceaMalus domestica golden23.214.1387.1878forward

Expression of CNT30234706

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSIVNEKTARVEKKRWIRIHIHENYIRTIKILDSKLIFLYYQSSSNCNTRIDRTEKNAKKRHLLPGNVGFEPRFLDGWGKVLVQT

Sequence

>CNT30234706
TGGAAAATTATTAACAAAGACTTTTAAAAAATGTTGTATTTTTCCATAGAATAAAATTCGCTCAAAAAAGACGTCATAAGATGTCGATCGTAAATGAGAA
GACTGCTCGGGTAGAAAAAAAAAGATGGATTCGTATTCACATACATGAGAATTATATAAGAACAATAAAAATCTTGGATTCAAAATTGATTTTTTTATAC
TATCAAAGTTCTTCCAATTGCAATACTCGTATAGACAGAACCGAAAAAAATGCAAAGAAGAGGCATCTTTTACCCGGTAACGTAGGGTTTGAACCAAGAT
TTCTAGATGGATGGGGTAAGGTATTAGTACAAACAA