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Detailed information on CNT30234559


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 5e-100

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562279Brassica oleraceaActinidia chinensis61.956.3282.22450forward

Expression of CNT30234559

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MVSKILQRSLTSDNSLNKESKHREHSQSSVLDLLHLQLREGLWVTRVSQVIKSSFAEDLRTGLEPNRLSELDSVPGQQLREDAA*

>peptide 2 (29 aa)
MAHLQWITSSSRFLANVSGSAERPAVSHP*

Sequence

>CNT30234559
TTTTGTAGAAATAACTTTTGCAATTGAATGATAACAAAAAAACATAAATCCATTTCCATTTAGTTCTACGACACAGTTGATAAGACAAAGAGTTATTGGA
TTAATGGTAAATCATACAAATACTTGCAAATTTTACATCTAAACAACATCTCTTTCTCCTCTTACACTCACAAGAAGCAAATACTGAAGCAAATTACAGA
TAAAAACATCGCTCACTTTCCGGGAACGAAGTTGGTAGCAAAGGCCCATGCATTGTTGTTAACTGGATCAGCCAAATGGTCAGCAAGATTCTCCAAAGGT
CCCTTACCAGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATAGCCAATCTTCCGTTCTTGATCTCCTTCACCTTCAACTCCGCGAAGGCCT
CTGGGTCACTAGGGTTTCCCAAGTAATCAAGTCCTCCTTCGCTGAAGATCTGCGAACCGGCCTTGAACCAAACCGCCTCTCCGAACTTGACTCCGTTCCT
GGCCAACAGCTCCGGGAAGACGCAGCCTAGGGCTCCGAGCATGGCCCACCTGCAGTGGATAACTTCTAGCTCACGGTTCCTCGCGAACGTCTCGGGATCG
GCTGAGAGACCTGCGGTGTCCCATCCGTAGTCTCCTGGGAACTCTCCGGTAAGGTAGCTCGGCGGCCATTGCGGTTGAGTGCTGAGCGAAATAAAACGTT
TATTGGTTGTTGTTTATGAGCCAAGAG