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Detailed information on CNT30234215


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541981Brassica oleraceaBrassica napus37.0928.5488.21458forward

Expression of CNT30234215

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSCVVVVLYLAPKGYIYLVGLWLWNGLVSNV*

>peptide 2 (33 aa)
MCCCCFIFGSKRLYLPCRLMALEWSCIKRLKAY*

>peptide 3 (32 aa)
MWVVTSSIEVGEAVSGKSPVIVCFCFLIFILA*

>peptide 4 (51 aa)
MLQEDFCDHFFALLMLCHVLLLFYIWLQKVIFTLSAYGSGMVLYQTFKSLLT

Sequence

>CNT30234215
ATCTGGTTTGCAGATCTCGAATTTGACGCTTCTCTCTTTCAATCTGGAGTGAAGGCGAGTCATTAGGAGCTTCGGAGGGTCTGTGGGGAGGTCGGATTTA
GCTGGCTTAGGGTTTGGTTCCCCAATTTTCTCCTTCAGGTGAGGCCCAAACCCTAGTGGAGTCTGTGTGTGAGACCGTGTGTTGGTAACTCTGTCGTTCT
TATGGGAGCAAGGAGCACAATCCGGTTCTTATCGCCACTTCTCCCTTGTCTTGCGGCTGTTCGGTTGGATCTGTGAATTTGTCAGCTTGGGTTCTCTTGG
ATAAGAAGGCTGGTTGCTTCATCACTGTCTCGGTTTGCTTGGGATGCCTTTCTAATCTCGATATATGTTTTCTGGTGCACGGTGGTAAGTTTATACCGGC
TCTGATGTGGGTTGTTACTTCTTCCATCGAGGTTGGTGAGGCGGTTTCAGGAAAGTCTCCGGTGATTGTGTGCTTTTGTTTTCTTATCTTTATCCTTGCA
TAGGCTTGTTGTATGATTGAAATGTGACTCAGAAATCCTTGATCTTTTGGAGCGTGTGTGGTCTTGAAGCTGTGGTGGTTTATTGGTGGCTGTTTAGGAT
TCTCTGGTCGGGTCCCCTGACCTTGGTCTTTAGCCTTTTCTTTTGTCCTCTTTGGTGACAAGTCGCTTATCGTGCTCTTTCGGTAATTAAGGTCTAGTTG
CTCGACCCTTGTTGTCAGTGTTGAATTAGCTCTGTGCGAAGCTTTGGTGGGGAGAAGTTATGTTGTCTCTTGGTTTTTAACTGACGGGTTTTCCGGGTTT
CTTGGTAAGAGACTGTGGAGCTATTTCTCAATTGCGTTCGGTCTCTGAGTAGTTGATTGTCTACTGTATTCTTCGTCAGCTTCTCGAGGTCTTTGATACG
TTTTCTCGTGGCTTCCTATAGTTGAAGCTTGTTCTTGAGTGGCGTTGTCACCTGGTTCCTGGTCTGGATCGTGTCTTGGAGCTCTTATCTCACCTCAAAT
AAATTGGATCGTCTTCGCTTTCTCGTTCATCTCGGCTTCTGTCATCGTTCAGCTTCGTATTAGTAGTGATTATTGGTATGCTCCAAGAAGATTTCTGTGA
TCATTTTTTTGCCTTGCTTATGTTATGTCATGTGTTGTTGTTGTTTTATATTTGGCTCCAAAAGGTTATATTTACCTTGTCGGCTTATGGCTCTGGAATG
GTCTTGTATCAAACGTTTAAAAGCTTATTAACTTA