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Detailed information on CNT302340


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697760Zea maysOryza sativa19.2632.5993.1888forward
CNT30339139Zea maysEragrostis tef12.4724.6891.2357forward

Expression of CNT302340

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGLLKPRMNTALTTDTERPCNQKHRWATTNTTRTKINPLD*

Sequence

>CNT302340
GCAACCTTTGCCTTGATTCGCACTCAAAGCGAGAGTAAGTAGCTTTTCAGATGAGCACAACCATTTTGCAGCACCAAGAAGCACCATTTTTTCCTTAAGA
TTAACTTAGAATAAAGCCTGACGGGGGTAACAGCATCCATCGATCCGCAGTCCATGCTGTTTGATGCATGGGTCTGCTGAAACCGAGGATGAACACAGCA
CTAACAACTGACACAGAGCGACCTTGCAATCAAAAACACAGATGGGCAACAACAAACACGACACGAACGAAGATAAACCCTCTGGACTAGGGTAAACATC
ACGGTAGCGAACAGGATAACTTGGCCGCGCGGGCCCCACCGCTCAGTTCCTCCAGTTCCCGTCGGAGTTGCCGCCGCCGACGAAGCAGCGGTACTCAACA
TCCGACGCCGCCATCTCGATCCGCTCACCCACGAACCCGAACCCCGGAGAACCTCAC