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Detailed information on CNT30232563


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4FGF5|ATPI_RANMC, E-value = 2e-147

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Ananas comosusOryza sativa25.7715.6191.85883forward
CNT30521912Ananas comosusSetaria italica7.6275.8784.67261reverse complement
CNT30535895Ananas comosusEucalyptus grandis5.4933.9490.43188forward
CNT30317837Ananas comosusCorylus avellana16.5853.9986.8568forward
CNT30703171Ananas comosusQuercus lobata23.796.8489.57815forward
CNT30268703Ananas comosusChenopodium quinoa7.5623.1591.89259forward
CNT3021394Ananas comosusCitrullus lanatus18.310091.71627forward
CNT30198909Ananas comosusPisum sativum16.0224.3488.89549forward
CNT30486613Ananas comosusOlea europaea2.2224.3688.1676forward
CNT30505351Ananas comosusNicotiana attenuata21.8321.5290.64748forward
CNT30161394Ananas comosusPistacia vera3.1850.788.99109forward
CNT30179912Ananas comosusSecale cereale14.0728.2788.59482forward
CNT30291829Ananas comosusTriticum aestivum25.7722.492.98883forward
CNT30226738Ananas comosusHordeum vulgare9.9826.2392.69342forward
CNT30401480Ananas comosusTriticum turgidum5.7527.3292.89197reverse complement
CNT30541450Ananas comosusBrassica napus22.7127.6886.89778forward
CNT30238613Ananas comosusBrassica oleracea9.0259.5485.44309forward
CNT30511101Ananas comosusSolanum lycopersicum21.8661.3486.65749forward
CNT30554009Ananas comosusOryza glaberrima4.8730.6490.42167forward
CNT30172770Ananas comosusTrifolium pratense12.9987.2587.42445forward
CNT30439866Ananas comosusAegilops tauschii3.3647.7289.57115forward
CNT30668721Ananas comosusTriticum dicoccoides4.8546.1192.17166forward
CNT3017990Ananas comosusZea mays25.7726.6892.3883forward
CNT30626489Ananas comosusDaucus carota6.5125.4392.83223forward
CNT30409854Ananas comosusPapaver somniferum4.5223.3890.97155forward
CNT3057337Ananas comosusAmborella trichopoda21.8920.1286.53750forward
CNT30149007Ananas comosusBrachypodium distachyon5.0252.7692.44172reverse complement
CNT30576822Ananas comosusOryza barthii4.8730.3688.62167reverse complement
CNT30604150Ananas comosusOryza punctata3.2420.4890.09111reverse complement
CNT30726491Ananas comosusLupinus angustifolius21.0261.888.61720forward

Expression of CNT30232563

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MIILLTRQNYFDISFLVSTHDEVFVNPYTYGSSYCISFFPTILSFNPSFFTLLYP*

>peptide 2 (30 aa)
MFCLDFKQFSFNHVNGLTLLVDRESKLIYQ*

>peptide 3 (37 aa)
MVCGFRTAMMTEPNKIAITTQEVISTWAWICKPPICQ*

>peptide 4 (37 aa)
MKQKKGLDLSCNPSNLNAVNCNQINICNHQYMQWISI*

>peptide 5 (57 aa)
MTGIGTTEGTKETRTTTTNSSANIFPNSRKLRDKGFVKSSRMLIGKSIGVGLMYFSK*

>peptide 6 (51 aa)
MIFQGKRAPDQLETKINRNIVPIKGTQGPYSSPIWVLLKSRINSRTYSKKF*

Sequence

>CNT30232563
TAATTGTCAGCAAAGTTGTTTCTTTATTTGTATTTGTTCTTAATTTAATTAAATTTTCTTTTTATTTAATTAAATAAATTTAAAAAATTTCTAATTTGGA
ATTAGATTTTTTCTTTTTTTCTTCAAATCCAAAAATTCCTCTTTTTTTATACATAGGTCGTCGATTCGGCATTGGATAAAAAAGGCAGAGTGCCCTTTTC
TTTCTAGTAAATGGTTCAAATCCTTTTATCGATATGAGTGTTCTATATCAGATAAATTACCAACTATTCATTTGGAAAACATTTCAGTACTAATGTAGTC
GTAGAAAGAGTACCATGTTTTGCCTGGACTTCAAACAGTTTAGCTTTAACCATGTTAATGGTCTCACATTATTGGTTGATAGAGAATCAAAGTTGATTTA
CCAATAAGTCACGAAATGCTATGGTTCTTACATATGATTTTTGAATTTATTCAGAAGTAATTCGTCGAGATCGTGCACCTTTTTTCCTATTTATCCTAAA
TATACTATAACTATAAATAACTATAAATAAAGTAAAGTGCAGCCGGATGGATCCAACCTATTCTTGAAATACACAACCCGCACACACTCCCTTTCCAAAA
AAAATCAATACACCAATCACTACACTTAGATTTATTGGATTTGTTGCTAAAATATCGGTATTAAACCCGAAACTCCCGGCGGATGGCCAGTGGCGTGAGA
AAACGAAAGAATCGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGACTGACAAAGAACAAAGTTCTTTTTCTATCACTTCGCTCGCCCCTTTCTT
TTTTGATCAATTTATTTATTTTTAATTGAATTTCCCCCTTTTTAATGGGAATAGATTAAATCTAGTAATTTCATTTAGGTTAGGTCTTAGGTCTCATTTC
AATTGCGAAATATATCGTTTGTGGAAACGTTTCCTAAAAGGAAAAAAGTTTCCATTGTACTAAGCTAAGGACGGGAAGGAAGAAAGCGAGTGATCTGGTA
ATTCCTCATCCTCAAAGCAGTCCTTCCTGGAGTCTCAACAAATAAGTAATTATAGGAGTAAAGTGTTGATATAATTCGAAGAAGGAAACGGCAATTTAAT
TTCAAGTTAATAAAATAAGAAAAAAAGTAAAAAGAGTATGTAATCTAAGGTACTTTTTTACATTTCTAGGATTAAACAAAAGGATTCGCAAATAAAAGCG
CTAATGCCACAACCAGTCCGTAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCCTCTGCTTCTGGTTGTCTCGC
AATACCCTCTACAGCTTGGCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGTCCTACAGCCAATCCAGCAGCAATAACGGAAGCGGCA
GAAATCAGTGGATTCATGGTAAGTTCCTCGCACCAAAAAAAAGAAAAAGAAATGGTTAATGATACAATCGACCAATGAATTATTACTTAATTTTATCATT
AAGTTTGATCATTAAGATCTATTGGGTCGAAGTAACTAAAAACTAATGATAATATTACTGACTCGTCAGAACTACTTCGATATCTCGTTTTTAGTTTCTA
CCCATGATGAAGTTTTTGTAAATCCATATACATACGGTTCTAGTTATTGCATTTCTTTCTTTCCAACCATTCTTTCATTCAATCCTTCGTTCTTTACTCT
TCTATATCCTTGAGTTCATCTGTTTTTTCATCCAATCCACAATCACAAATGAAACAGAAGAAAGGACTTGACTTATCTTGTAATCCATCTAATCTAAATG
CAGTAAACTGCAATCAAATCAATATATGCAATCATCAATATATGCAATGGATATCAATATGATCGATATCAACGATATCAATATATCAATATAACGATAT
CAATATGTATATCAATACATATATATATATTTTTTATTTTGCTATAACTAACTATATATATATATTATATATGTATAGCATATAGTTAGATATATATAGT
TAGTTAGTATATAGGTAGGGTATAAGGTAGGGTATAAGGACTTATATTTATATATAGATAGGACTATATAACTAGTGAATATCTAATATTGCATATACAT
ATTACATATACATTTCTTTCTTCCATAACGTAAACTGGCCGCATTTTATATTGAATCGGATTATAGAATCATTCCTTGAAACCCACACAAAAAGTGGCTG
GACTTATAGACATTACATACATCTAGTGTGACCTCCCCAACCCATTTTTTTTTTTTACAATTCCGTAATATCGTTCATCTTCTCTCCTACGACTCTAGGT
CATATCTTCATACGTATTTATATCTATTATGTTCTCCAACCAAGCAGATTATCTTGAACCATGCATGAATTGGGATAAGCTAAAAAAAAAGACTATTTCG
AAAACTAGTCAATGATGACCCTCCATGGATTCGCCTATATAAGCCGCGGCCAACGTTGCAAAAATAAGAGCTTGAATACCACTTGTAAATAATCCAAGAA
ACATGACAGGTATAGGAACTACTGAAGGGACTAAAGAAACAAGAACAACAACTACTAATTCATCAGCCAATATATTCCCGAATAGTCGAAAGCTAAGAGA
TAAAGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGTATTGGAGTTGGTTTGATGTATTTCTCGAAATAACCCAATCCTTTTTTGGTAAGACCC
GCATAAAAATATGCCACTGACGTGGGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTGGGCGCAGCTAACTCCCCATGAGGTAACTGTATGATTT
TCCAAGGTAAAAGAGCACCTGACCAATTAGAAACAAAAATAAATAGGAACATAGTTCCAATAAAGGGAACCCAAGGTCCATATTCTTCTCCAATCTGGGT
TTTGCTCAAGTCTCGAATAAATTCAAGGACATATTCAAAGAAATTCTGACCGTCGGTCGGAATGGTTTGTGGATTCCGAACAGCTATGATGACTGAACCT
AACAAGATAGCAATTACGACCCAAGAAGTGATAAGTACTTGGGCATGGATTTGTAAACCTCCTATTTGCCAATAGAAATGTTGGCCTACTTCTACACCCG
ATATATCATATAACCCCTTGAGTGTTTTAATGTAACATGGTATAACATTCATATTGTCCTCTGATAGAAATTGAACTTCAAAAAAGGAATTAGTTTGATT
CAACCATTTCTTTCTCAACTCACCAACTTGAATCATTAATCATATATTTAGGATACCAAGAAATCACATAACATCATAATATATATCAATATCCCCAGTT
CTTTTTTTTTTATCTATTTTGTTAAATGCAAAATAGATAAAAAAGTAACCGATCCAATAAATCTATGGAGTTGCCCAATAATTAACATTAACTAATCTTA
TTATTCTTAATCTTAATCATAATCAA