CANTATAdb - search

Detailed information on CNT30231835

BLAST search results

BLAST vs Swiss-Prot:
sp|Q943L2|H2B11_ORYSJ, E-value = 2e-42

BLAST vs NONCODE: nothing found

Expression of CNT30231835

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLMKEFMMLMALLEMPMSGWTCLSTLKM*

>peptide 2 (37 aa)
MIHRLLLYSSHRKNYPCITSYPLIHQTIQLHNHHPKP*

>peptide 3 (48 aa)
MYYIIPTHPSNHPITQSSPKALRKREKRKKGNPRYHPHHRIEKIPIKP*

Sequence

>CNT30231835
CACAAAACAAAACCGGCAATTAATTAATGGTAATTCATCATCAAATCCCTCAAAAAAATAACAAAACAGAGAATTAAAACATGACTGATCCATCGGCGTA
CCAAGTATAAACCTTGAAATCACCCCCTTTCAATTTCAATCACAAACCAAAAGAGGTAAACTCAGCAATTACAATAAGAACACTTGATGATACACCGTCT
ACTTCTATATTCTTCACATAGGAAAAACTACCCATGTATTACATCATACCCACTCATCCATCAAACCATCCAATTACACAATCATCACCCAAAGCCCTAA
GAAAAAGGGAAAAAAGAAAAAAAGGAAACCCTAGATATCATCCCCATCATCGGATCGAGAAGATCCCCATCAAACCCTAACCCTAAGAGCTGGTGAACTT
GGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACCGAGGTCTGGATCTCGCGGGAGGCCTCCTGAGCG
AGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGCTCATGGCCTTGCTGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTGAAGATGT
AGATCTTGTACGTCTCGCTCCCCTTCTTCGCCTTCTTCTTCTTCTTCTTG