Detailed information on CNT30231757


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 1e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675638Ananas comosusSetaria viridis41.0621.8688.89108forward
CNT30702258Ananas comosusQuercus lobata34.9819.5786.9692forward
CNT30376211Ananas comosusArabidopsis thaliana39.5414.3886.54104forward
CNT30619260Ananas comosusSesamum indicum49.0512.1182.17129forward
CNT3020603Ananas comosusCitrullus lanatus39.546.7286.54104forward
CNT3072357Ananas comosusQuercus suber51.3313.1586.67135forward
CNT30380227Ananas comosusManihot esculenta35.3622.388.1793forward
CNT30402445Ananas comosusBeta vulgaris47.9128.3888.1126forward
CNT30200315Ananas comosusPisum sativum35.3618.0283.8793forward
CNT30505192Ananas comosusNicotiana attenuata23.5710.9788.7162forward
CNT30709695Ananas comosusGlycine max52.4741.3286.23138forward
CNT30543653Ananas comosusBrassica napus44.8717.185.59118forward
CNT3076654Ananas comosusBrassica juncea33.8419.0685.3989forward
CNT30261371Ananas comosusBrassica rapa48.6730.6286.72128forward
CNT30612558Ananas comosusArabis alpina35.7424.9385.1194forward
CNT30607325Ananas comosusGossypium raimondii48.679.9284.38128forward
CNT30720770Ananas comosusTriticum spelta38.0216.6788100forward
CNT30705212Ananas comosusPrunus avium35.7425.5485.1194forward
CNT3021984Ananas comosusPopulus trichocarpa39.544.8686.54104forward
CNT30329805Ananas comosusDioscorea rotundata46.7720.9586.99123forward
CNT30103876Ananas comosusOryza rufipogon46.3926.9386.07122forward
CNT30117878Ananas comosusOryza nivara36.1221.1189.4795forward
CNT30723539Ananas comosusLupinus angustifolius39.548.1786.54104forward

Expression of CNT30231757

Peptides detected in this lncRNA

>peptide 1 (86 aa)
ALNTWVGLQPVHVDLIIEVPNIANNSIILHLLHVVHHDDVLVARGDDILQSEHGDALHQGLEGAYGVNLSDDHTGPSLLQGSSTALA

>peptide 2 (74 aa)
MSISLSKCPILQTIALFFICFMWSTMMMSLLPVVTTSSKVSTGMPSIRAWRAHMGSISVTITRAPACFKAAAQPL

Sequence

>CNT30231757
ATGCGCTTAACACCTGGGTAGGTCTCCAACCCGTGCATGTCGATCTCATTATCGAAGTGCCCAATATTGCAAACAATAGCATTATTCTTCATCTGCTTCA
TGTGGTCCACCATGATGATGTCCTTGTTGCCCGTGGTGACGACATCCTCCAAAGTGAGCACGGGGATGCCCTCCATCAGGGCTTGGAGGGCGCATATGGG
GTCAATCTCAGTGACGATCACACGGGCCCCAGCCTGCTTCAAGGCAGCAGCACAGCCCTTGCC