Detailed information on CNT30231426


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692141Ananas comosusOryza sativa31.3436.6689.02246forward
CNT30317088Ananas comosusCorylus avellana23.3125.0385.25183forward
CNT30616476Ananas comosusSesamum indicum24.0838.185.71189forward
CNT30589607Ananas comosusMusa acuminata39.8779.8584.35313forward
CNT30552977Ananas comosusOryza glaberrima33.1238.8189.23260forward
CNT30132965Ananas comosusLolium perenne34.0158.1786.52267forward
CNT30345256Ananas comosusEragrostis tef33.1250.5888.85260forward
CNT30595924Ananas comosusOryza meridionalis33.1253.7289.23260forward
CNT30101081Ananas comosusOryza rufipogon33.1221.3589.23260forward
CNT30116289Ananas comosusOryza nivara33.1233.2589.23260forward
CNT30113588Ananas comosusFicus carica22.828.3783.8179forward

Expression of CNT30231426

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LVRLAKHRHIFLFPLDYQESLKDSANQTHPKYKLLDLS*

Sequence

>CNT30231426
ACTTAGTGCGTTTAGCCAAACACCGTCATATTTTTTTATTTCCATTGGATTACCAGGAATCTTTAAAAGATAGTGCAAACCAAACGCACCCTAAATATAA
GCTGCTTGATCTCTCTTAAAGGTCCAAAACATGGCCACAAAGGCAACTACAGGCCCAGTAATTATACATACCCTCGCCCAACCAAAATAGGAAAAAAATA
AGAAGAAGAAGAAAAAGGGTCAGAAACACGATCAGAACAATAGCTACTGCACTAATCAACTACTAATACACCACACTAAAAACCAACATACAACAATCTA
CAATTTTATTTTGTCCCTTCTCTTTTTTTGTCTTCAATACAGGATGAAAATTCCGTCTCCCCCGCCACCGCCGTCGCGCTAATTGGTATAATTCTTCACT
GCAGCGTGGGGCTCGGCGGCCTTGGCGTCCGGGGTGGGCTCCACGGTAGAATGTATAGAAGAGCTTGAAAGGGAACACGATCTGCTGCAGCTTGACCTGC
CCATACACGCCCTCGAACACGCCGGAGCCGCCGGTCACCGCGAGGTACGACTCCTCGTAGGTGAGGTACGGCCCCTGCACGGAGATGTGGCCGTAGTCAC
CGAAGTAGAAGCTGTAGATCGCCTCGTAGCGGTCGCCGTTCCGCTCCGGCACGTGCTGGATCAAAATGCACAGCCCCGCCGTGATCCCCAGCCGCTTCTC
CAGGTTCCCGTGATTTGATCCCAAACAGAGCAACTTTAGGGTTTAAGAAGATTCTAGAGAGCGGATCGGAGGGGAGCAAGCTCAC