Detailed information on CNT30231113


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MMR3|NU4C_DIOEL, E-value = 2e-145

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196709Ananas comosusPisum sativum76.6932.883.25579forward
CNT30184264Ananas comosusSecale cereale77.8834.3988.61588forward
CNT30221821Ananas comosusHordeum vulgare77.8847.1987.41588forward
CNT30394664Ananas comosusTriticum turgidum77.4860.3789.06585forward
CNT30564484Ananas comosusActinidia chinensis23.4411.9583.05177forward
CNT3017910Ananas comosusZea mays78.1524.4688.64590forward
CNT30610707Ananas comosusGossypium raimondii14.8329.5585.71112forward
CNT3055427Ananas comosusAmborella trichopoda52.0514.2486.26393forward

Expression of CNT30231113

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRPFLIGFLLKAYMYCNVLLRGYQVTMYVGV*

>peptide 2 (45 aa)
GFNIIAIAITKVISIFGIKRYFVLVISPENTTNSATKSQGVYFLT*

Sequence

>CNT30231113
AGGATTTAATATCATTGCAATTGCCATTACAAAAGTAATTAGCATTTTTGGCATTAAAAGATATTTTGTACTAGTAATTAGTCCAGAGAATACTACAAAT
TCAGCAACAAAATCACAAGGAGTCTATTTTCTTACTTAAAGTGATTTTGAGTGCCTGAACATGGTAAATATTTTTGGCATTGGGATAGATATCCCTCCCA
TTTCTTCGAGATAAACAAGACGTGTTCTATCACAACTCGTTCCCGCCAAGAAAAAAAGTGCAGCACCAATAAATCCATGAGAGAGCATTTGTAAAATAGC
TCCATTGAGTCCCATGTCGGTTATAGAACCAATTCCTATAATTGTGAAACCCATGTGAGATACAGAGGAATAGGCTATTCTCTTTTTTAAATTACGTTGA
CCAAGAGAAGTTGAAGCTGCATAGATTATTTGCATTGTTCCTATTATCACCAACCAGGGAGAAAATATAGAGTGAGCGTGGGGTAATAATTCCATATTGA
TCCGAATCAATCCATATGCGCCCATTTTTAATAGGATTCCTGCTAAAAGCATACATGTACTGTAATGTGCTTCTCCGTGGGTATCAGGTAACCATGTATG
TAGGGGTATAATCGGCAATTTTACAGCATAAGCAATAAGGAAGCCAAAATAGAATATTATTTCCAACGACACAGGATATGATTGATTAATTAATCTTTCA
AAATCTAATGTTGGTTCATTGGAACCATATAAACCCATACCNAGATCAACTCTAA